FFCP PHASE1:Hg19::chr2:28768212..28768254,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:28768212..28768254,+
|short_description=p@chr2:28768212..28768254,+
|description=CAGE_peak_at_chr2:28768212..28768254,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:28768212..28768254,+ | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_at_chr2:28768212..28768254,+ | |||
|id=chr2:28768212..28768254,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.66e-11!3;CL:0000861!1.66e-11!3;CL:0000623!3.89e-10!3;CL:0000825!3.89e-10!3;CL:0000223!6.88e-09!59;CL:1000415!2.31e-07!2;CL:0000066!3.66e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;7.71e-21;1!CL:1000600;7.71e-21;1!CL:1000415;4.09e-11;2!CL:0002178;4.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,9.43e-21,1;CL:1000600,9.43e-21,1;CL:1000415,3.70e-11,2;CL:0002178,4.84e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.68e-13!106;DOID:0050687!4.86e-09!143;DOID:3493!1.46e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.82e-11;2!DOID:3493;2.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.03e-14,106;DOID:0050687,1.96e-13,143;DOID:1909,1.82e-11,2;DOID:3493,2.02e-11,2;DOID:162,6.25e-08,235;DOID:14566,9.40e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.60e-11!7;UBERON:0001173!1.60e-11!7;UBERON:0004912!1.60e-11!7;UBERON:0004119!3.22e-11!169;UBERON:0000925!3.22e-11!169;UBERON:0006595!3.22e-11!169;UBERON:0005911!4.30e-11!82;UBERON:0004921!3.12e-10!129;UBERON:0004185!3.12e-10!129;UBERON:0000077!3.56e-10!130;UBERON:0000344!2.92e-09!12;UBERON:0001007!3.64e-09!155;UBERON:0001555!3.64e-09!155;UBERON:0007026!3.64e-09!155;UBERON:0009497!5.09e-09!25;UBERON:0000015!5.09e-09!25;UBERON:0002423!5.09e-09!25;UBERON:0006235!5.09e-09!25;UBERON:0004161!5.09e-09!25;UBERON:0002394!4.83e-08!4;UBERON:0003928!4.83e-08!4;UBERON:0003929!2.23e-07!54;UBERON:0001041!2.84e-07!98;UBERON:0003350!9.82e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.71e-21;1!UBERON:0001256;7.71e-21;1!UBERON:0001259;7.71e-21;1!UBERON:0001255;4.09e-11;2!UBERON:0001556;4.09e-11;2!UBERON:0002110;7.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,9.43e-21,1;UBERON:0001256,9.43e-21,1;UBERON:0001259,9.43e-21,1;UBERON:0001255,4.52e-11,2;UBERON:0001556,4.52e-11,2;UBERON:0002110,7.26e-08,3;UBERON:0006242,7.26e-08,3 | |||
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| ||
|short_description=p@chr2:28768212..28768254,+ | |||
}} | }} |
Latest revision as of 09:22, 29 July 2015
Short description: | p@chr2:28768212..28768254, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28768212..28768254, + |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 9.43e-21 | 1 |
lower urinary tract cell | 9.43e-21 | 1 |
epithelial cell of gall bladder | 3.70e-11 | 2 |
epithelial cell of stomach | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 9.43e-21 | 1 |
wall of urinary bladder | 9.43e-21 | 1 |
mucosa of urinary bladder | 9.43e-21 | 1 |
urinary bladder | 4.52e-11 | 2 |
lower urinary tract | 4.52e-11 | 2 |
gallbladder | 7.26e-08 | 3 |
gall bladder primordium | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.03e-14 | 106 |
cell type cancer | 1.96e-13 | 143 |
melanoma | 1.82e-11 | 2 |
signet ring cell adenocarcinoma | 2.02e-11 | 2 |
cancer | 6.25e-08 | 235 |
disease of cellular proliferation | 9.40e-08 | 239 |