FFCP PHASE1:Hg19::chr2:29220315..29220325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29220315..29220325,+ | |||
|coexpression_cluster_id=C695 | |||
|description=CAGE_peak_at_chr2:29220315..29220325,+ | |description=CAGE_peak_at_chr2:29220315..29220325,+ | ||
|id=chr2:29220315..29220325,+ | |id=chr2:29220315..29220325,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.39e-66;3!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.39e-66,3;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!6.10e-08!1;DOID:1357!6.10e-08!1 | |ontology_enrichment_disease=DOID:0050619!6.10e-08!1;DOID:1357!6.10e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0002298!2.22e-28!8;UBERON:0005743!5.14e-20!86;UBERON:0006331!6.09e-20!3;UBERON:0000955!7.00e-20!69;UBERON:0006238!7.00e-20!69;UBERON:0000988!1.51e-19!3;UBERON:0001049!7.08e-19!57;UBERON:0005068!7.08e-19!57;UBERON:0006241!7.08e-19!57;UBERON:0007135!7.08e-19!57;UBERON:0001017!1.19e-18!82;UBERON:0000073!8.02e-18!94;UBERON:0001016!8.02e-18!94;UBERON:0007023!2.41e-16!115;UBERON:0003075!1.03e-15!86;UBERON:0007284!1.03e-15!86;UBERON:0002616!1.75e-15!59;UBERON:0003076!5.87e-15!15;UBERON:0003057!5.87e-15!15;UBERON:0002346!6.97e-15!90;UBERON:0002148!9.17e-14!2;UBERON:0009662!9.17e-14!2;UBERON:0004733!3.49e-13!12;UBERON:0002028!3.49e-13!12;UBERON:0007277!3.49e-13!12;UBERON:0000033!5.18e-13!123;UBERON:0000153!2.99e-12!129;UBERON:0007811!2.99e-12!129;UBERON:0004732!3.71e-12!13;UBERON:0002308!1.13e-11!9;UBERON:0000125!1.13e-11!9;UBERON:0004121!1.05e-09!169;UBERON:0001896!1.16e-09!3;UBERON:0005290!1.16e-09!3;UBERON:0010096!1.16e-09!3;UBERON:0000924!2.12e-09!173;UBERON:0006601!2.12e-09!173;UBERON:0002780!1.19e-08!41;UBERON:0001890!1.19e-08!41;UBERON:0006240!1.19e-08!41;UBERON:0003080!2.01e-08!42;UBERON:0002135!3.10e-08!1;UBERON:0002020!3.78e-08!34;UBERON:0003528!3.78e-08!34;UBERON:0001764!6.10e-08!1;UBERON:0001825!6.10e-08!1;UBERON:0002038!6.52e-08!1;UBERON:0009661!6.52e-08!1;UBERON:0007190!1.75e-07!1;UBERON:0003056!5.64e-07!61;UBERON:0002680!7.41e-07!9;UBERON:0001895!7.41e-07!9;UBERON:0010092!7.41e-07!9 | |ontology_enrichment_uberon=UBERON:0002298!2.22e-28!8;UBERON:0005743!5.14e-20!86;UBERON:0006331!6.09e-20!3;UBERON:0000955!7.00e-20!69;UBERON:0006238!7.00e-20!69;UBERON:0000988!1.51e-19!3;UBERON:0001049!7.08e-19!57;UBERON:0005068!7.08e-19!57;UBERON:0006241!7.08e-19!57;UBERON:0007135!7.08e-19!57;UBERON:0001017!1.19e-18!82;UBERON:0000073!8.02e-18!94;UBERON:0001016!8.02e-18!94;UBERON:0007023!2.41e-16!115;UBERON:0003075!1.03e-15!86;UBERON:0007284!1.03e-15!86;UBERON:0002616!1.75e-15!59;UBERON:0003076!5.87e-15!15;UBERON:0003057!5.87e-15!15;UBERON:0002346!6.97e-15!90;UBERON:0002148!9.17e-14!2;UBERON:0009662!9.17e-14!2;UBERON:0004733!3.49e-13!12;UBERON:0002028!3.49e-13!12;UBERON:0007277!3.49e-13!12;UBERON:0000033!5.18e-13!123;UBERON:0000153!2.99e-12!129;UBERON:0007811!2.99e-12!129;UBERON:0004732!3.71e-12!13;UBERON:0002308!1.13e-11!9;UBERON:0000125!1.13e-11!9;UBERON:0004121!1.05e-09!169;UBERON:0001896!1.16e-09!3;UBERON:0005290!1.16e-09!3;UBERON:0010096!1.16e-09!3;UBERON:0000924!2.12e-09!173;UBERON:0006601!2.12e-09!173;UBERON:0002780!1.19e-08!41;UBERON:0001890!1.19e-08!41;UBERON:0006240!1.19e-08!41;UBERON:0003080!2.01e-08!42;UBERON:0002135!3.10e-08!1;UBERON:0002020!3.78e-08!34;UBERON:0003528!3.78e-08!34;UBERON:0001764!6.10e-08!1;UBERON:0001825!6.10e-08!1;UBERON:0002038!6.52e-08!1;UBERON:0009661!6.52e-08!1;UBERON:0007190!1.75e-07!1;UBERON:0003056!5.64e-07!61;UBERON:0002680!7.41e-07!9;UBERON:0001895!7.41e-07!9;UBERON:0010092!7.41e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.48e-40;5!UBERON:0010039;1.48e-40;5!UBERON:0001041;1.43e-15;14!UBERON:0005409;4.42e-10;22!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,5.22e-26,8;UBERON:0010039,5.22e-26,8;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p@chr2:29220315..29220325,+ | |short_description=p@chr2:29220315..29220325,+ | ||
}} | }} |
Latest revision as of 09:26, 29 July 2015
Short description: | p@chr2:29220315..29220325, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29220315..29220325, + |
Coexpression cluster: | C695_gastric_mesothelioma_amniotic_chorionic_Mast_tongue_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.39e-66 | 3 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
stomach | 5.22e-26 | 8 |
food storage organ | 5.22e-26 | 8 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |