FFCP PHASE1:Hg19::chr2:45233162..45233190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:45233162..45233190,- | |||
|coexpression_cluster_id=C1906 | |||
|description=CAGE_peak_at_chr2:45233162..45233190,- | |description=CAGE_peak_at_chr2:45233162..45233190,- | ||
|id=chr2:45233162..45233190,- | |id=chr2:45233162..45233190,- | ||
|ontology_enrichment_celltype=CL:0000499!3.07e-08!27;CL:0000327!4.05e-08!14;CL:0002556!5.86e-07!6 | |ontology_enrichment_celltype=CL:0000499!3.07e-08!27;CL:0000327!4.05e-08!14;CL:0002556!5.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000135;8.65e-11;3!CL:0000388;8.65e-11;3!CL:0002623;9.02e-10;3!CL:0000499;1.91e-09;28!CL:0000327;2.37e-09;15!CL:0000153;7.77e-09;9!CL:0000447;7.77e-09;9!CL:0000138;9.09e-09;6!CL:0000151;2.19e-08;36!CL:0002575;3.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,7.54e-11,3;CL:0000388,7.54e-11,3;CL:0002623,6.02e-10,3;CL:0000151,8.77e-10,36;CL:0000499,1.88e-09,28;CL:0000327,2.45e-09,15;CL:0000153,5.99e-09,9;CL:0000447,5.99e-09,9;CL:0000058,6.61e-09,6;CL:0000138,6.61e-09,6;CL:0002575,4.94e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000078!3.22e-08!18;UBERON:0001004!8.77e-08!72;UBERON:0001737!3.21e-07!9;UBERON:0000165!4.21e-07!28;UBERON:0000930!4.21e-07!28;UBERON:0001758!5.86e-07!6;UBERON:0003672!5.86e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.65e-11;3!UBERON:0000043;8.65e-11;3!UBERON:0007845;8.65e-11;3!UBERON:0000165;5.43e-09;28!UBERON:0000075;1.76e-08;16!UBERON:0001044;3.17e-08;6!UBERON:0003293;3.17e-08;6!UBERON:0003294;3.17e-08;6!UBERON:0010047;3.17e-08;6!UBERON:0003408;3.17e-08;6!UBERON:0000167;3.17e-08;6!UBERON:0001434;5.25e-08;36!UBERON:0000161;4.64e-07;19!UBERON:0000166;4.64e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.54e-11,3;UBERON:0000043,7.54e-11,3;UBERON:0007845,7.54e-11,3;UBERON:0000165,1.04e-10,29;UBERON:0000930,1.04e-10,29;UBERON:0000075,2.05e-08,16;UBERON:0001044,2.78e-08,6;UBERON:0003293,2.78e-08,6;UBERON:0003294,2.78e-08,6;UBERON:0010047,2.78e-08,6;UBERON:0000167,2.78e-08,6;UBERON:0000166,6.64e-08,22;UBERON:0011137,3.26e-07,14 | |||
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| ||
|short_description=p@chr2:45233162..45233190,- | |short_description=p@chr2:45233162..45233190,- | ||
}} | }} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45233162..45233190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45233162..45233190, - |
Coexpression cluster: | C1906_Multipotent_small_normal_Fibroblast_smallcell_breast_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 7.54e-11 | 3 |
tendon cell | 7.54e-11 | 3 |
acinar cell of salivary gland | 6.02e-10 | 3 |
secretory cell | 8.77e-10 | 36 |
stromal cell | 1.88e-09 | 28 |
extracellular matrix secreting cell | 2.45e-09 | 15 |
GAG secreting cell | 5.99e-09 | 9 |
carbohydrate secreting cell | 5.99e-09 | 9 |
chondroblast | 6.61e-09 | 6 |
chondrocyte | 6.61e-09 | 6 |
central nervous system pericyte | 4.94e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.54e-11 | 3 |
tendon | 7.54e-11 | 3 |
regular connective tissue | 7.54e-11 | 3 |
mouth | 1.04e-10 | 29 |
stomodeum | 1.04e-10 | 29 |
subdivision of skeletal system | 2.05e-08 | 16 |
saliva-secreting gland | 2.78e-08 | 6 |
gland of oral region | 2.78e-08 | 6 |
gland of foregut | 2.78e-08 | 6 |
oral gland | 2.78e-08 | 6 |
oral cavity | 2.78e-08 | 6 |
oral opening | 6.64e-08 | 22 |
axial skeletal system | 3.26e-07 | 14 |