FFCP PHASE1:Hg19::chr2:70581573..70581577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:70581573..70581577,- | |||
|description=CAGE_peak_at_chr2:70581573..70581577,- | |description=CAGE_peak_at_chr2:70581573..70581577,- | ||
|id=chr2:70581573..70581577,- | |id=chr2:70581573..70581577,- | ||
|ontology_enrichment_celltype=CL:0002368!4.09e-15!13;CL:0002202!4.32e-13!9;CL:0002632!4.32e-13!9;CL:0000068!6.21e-11!3;CL:0000069!6.21e-11!3;CL:0000307!6.21e-11!3;CL:0000377!6.21e-11!3;CL:0002328!7.52e-11!3;CL:0000066!5.30e-10!254;CL:0002327!3.07e-08!4;CL:0002159!6.86e-08!13;CL:0000575!3.70e-07!2;CL:0002076!9.16e-07!43 | |ontology_enrichment_celltype=CL:0002368!4.09e-15!13;CL:0002202!4.32e-13!9;CL:0002632!4.32e-13!9;CL:0000068!6.21e-11!3;CL:0000069!6.21e-11!3;CL:0000307!6.21e-11!3;CL:0000377!6.21e-11!3;CL:0002328!7.52e-11!3;CL:0000066!5.30e-10!254;CL:0002327!3.07e-08!4;CL:0002159!6.86e-08!13;CL:0000575!3.70e-07!2;CL:0002076!9.16e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.50e-44;4!CL:0002368;1.94e-38;13!CL:0002202;6.99e-36;9!CL:0002632;6.99e-36;9!CL:0000307;8.69e-28;3!CL:0002328;1.59e-27;3!CL:0002076;1.88e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.20e-44,4;CL:0002368,1.80e-38,13;CL:0002202,6.12e-36,9;CL:0002632,6.12e-36,9;CL:0000068,9.30e-28,3;CL:0000069,9.30e-28,3;CL:0000307,9.30e-28,3;CL:0000377,9.30e-28,3;CL:0002328,1.22e-27,3;CL:0002076,4.56e-12,42;CL:0000223,9.15e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000377;8.69e-28;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!7.52e-11!3;UBERON:0002031!7.52e-11!3;UBERON:0001911!3.07e-08!4;UBERON:0005333!3.07e-08!4;UBERON:0008425!3.07e-08!4;UBERON:0005311!3.07e-08!4;UBERON:0002185!3.22e-08!4;UBERON:0007196!4.10e-08!14;UBERON:0001558!4.10e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.50e-44;4!UBERON:0004815;1.59e-27;3!UBERON:0002031;1.59e-27;3!UBERON:0007196;9.51e-22;15!UBERON:0001558;9.51e-22;15!UBERON:0002185;5.91e-17;5!UBERON:0003126;1.64e-12;7!UBERON:0001005;1.64e-12;7!UBERON:0000485;2.12e-12;7!UBERON:0005178;6.96e-10;34!UBERON:0002224;6.96e-10;34!UBERON:0000065;1.50e-09;44!UBERON:0000072;5.40e-09;37!UBERON:0005181;2.04e-08;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.20e-44,4;UBERON:0005333,1.20e-44,4;UBERON:0008425,1.20e-44,4;UBERON:0005311,1.20e-44,4;UBERON:0004815,1.22e-27,3;UBERON:0002031,1.22e-27,3;UBERON:0000076,9.34e-23,8;UBERON:0007196,8.78e-22,15;UBERON:0001558,8.78e-22,15;UBERON:0002185,5.03e-17,5;UBERON:0005153,1.54e-13,37;UBERON:0003126,1.68e-12,7;UBERON:0001005,1.68e-12,7;UBERON:0005157,1.09e-10,47;UBERON:0000485,6.78e-10,9;UBERON:0005178,7.80e-10,34;UBERON:0002224,7.80e-10,34;UBERON:0005181,1.46e-09,35;UBERON:0000065,2.08e-09,54;UBERON:0008947,7.83e-09,38;UBERON:0003258,7.83e-09,38;UBERON:0001048,1.39e-07,160;UBERON:0000072,3.39e-07,47;UBERON:0001004,7.05e-07,74 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.6024118375565,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,2.1349799145941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.603173834469785,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,1.97028749946266,2.61570544662566,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.574890092096664,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,2.55225424989168,0,0,0,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.673554789078584,4.02181365321472,3.26672954583968,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0.596143835108969,0,0,0.0801588202515337,0,0,0,0,0,0.864328787928898,0.248505071130865,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:70581573..70581577,- | |short_description=p@chr2:70581573..70581577,- | ||
}} | }} |
Latest revision as of 11:57, 29 July 2015
Short description: | p@chr2:70581573..70581577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:70581573..70581577, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.20e-44 | 4 |
respiratory epithelial cell | 1.80e-38 | 13 |
epithelial cell of tracheobronchial tree | 6.12e-36 | 9 |
epithelial cell of lower respiratory tract | 6.12e-36 | 9 |
duct epithelial cell | 9.30e-28 | 3 |
branched duct epithelial cell | 9.30e-28 | 3 |
tracheal epithelial cell | 9.30e-28 | 3 |
tracheoblast | 9.30e-28 | 3 |
bronchial epithelial cell | 1.22e-27 | 3 |
endo-epithelial cell | 4.56e-12 | 42 |
endodermal cell | 9.15e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.20e-44 | 4 |
mammary bud | 1.20e-44 | 4 |
mammary ridge | 1.20e-44 | 4 |
mammary placode | 1.20e-44 | 4 |
lower respiratory tract epithelium | 1.22e-27 | 3 |
epithelium of bronchus | 1.22e-27 | 3 |
external ectoderm | 9.34e-23 | 8 |
tracheobronchial tree | 8.78e-22 | 15 |
lower respiratory tract | 8.78e-22 | 15 |
bronchus | 5.03e-17 | 5 |
epithelial bud | 1.54e-13 | 37 |
trachea | 1.68e-12 | 7 |
respiratory airway | 1.68e-12 | 7 |
epithelial fold | 1.09e-10 | 47 |
simple columnar epithelium | 6.78e-10 | 9 |
thoracic cavity element | 7.80e-10 | 34 |
thoracic cavity | 7.80e-10 | 34 |
thoracic segment organ | 1.46e-09 | 35 |
respiratory tract | 2.08e-09 | 54 |
respiratory primordium | 7.83e-09 | 38 |
endoderm of foregut | 7.83e-09 | 38 |
primordium | 1.39e-07 | 160 |
segment of respiratory tract | 3.39e-07 | 47 |
respiratory system | 7.05e-07 | 74 |