FFCP PHASE1:Hg19::chr2:78695534..78695542,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:78695534..78695542,- to FFCP PHASE1:Hg19::chr2:78695534..78695542,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:78695534..78695542,- | |||
|coexpression_cluster_id=C1914 | |||
|description=CAGE_peak_at_chr2:78695534..78695542,- | |||
|id=chr2:78695534..78695542,- | |||
|ontology_enrichment_celltype=CL:0000039!6.31e-10!7;CL:0000586!6.31e-10!7;CL:0002322!3.34e-09!5;CL:0000066!3.47e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.08e-13;2!CL:0002553;5.58e-08;1!CL:0000319;2.10e-07;1!CL:0002563;2.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.27e-13,2;CL:0000066,1.36e-08,253;CL:0002553,5.96e-08,1;CL:0000223,1.44e-07,58;CL:0000319,2.04e-07,1;CL:0002563,2.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.63e-28!239;DOID:162!1.78e-27!235;DOID:305!2.52e-25!106;DOID:0050687!2.27e-24!143;DOID:0050686!4.55e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.94e-13;2!DOID:299;2.15e-08;25!DOID:305;2.37e-08;106!DOID:1799;4.27e-08;1!DOID:10165;4.27e-08;1!DOID:1798;4.27e-08;1!DOID:0050619;9.43e-08;1!DOID:1357;9.43e-08;1!DOID:12603;9.43e-08;1!DOID:3151;2.10e-07;1!DOID:3030;2.10e-07;1!DOID:3149;2.10e-07;1!DOID:3119;2.66e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.82e-22,106;DOID:0050687,1.20e-18,143;DOID:162,3.74e-17,235;DOID:14566,1.09e-16,239;DOID:3493,2.39e-13,2;DOID:299,1.87e-08,25;DOID:1799,4.28e-08,1;DOID:10165,4.28e-08,1;DOID:1798,4.28e-08,1;DOID:0050619,7.26e-08,1;DOID:1357,7.26e-08,1;DOID:12603,9.44e-08,1;DOID:3030,2.04e-07,1;DOID:3119,2.48e-07,14;DOID:3151,2.63e-07,1;DOID:3149,2.63e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.01e-09;3!UBERON:0007195;5.58e-08;1!UBERON:0001764;9.43e-08;1!UBERON:0001825;9.43e-08;1!UBERON:0001242;2.47e-07;4!UBERON:0001262;2.47e-07;4!UBERON:0004786;2.47e-07;4!UBERON:0004808;2.47e-07;4!UBERON:0001277;2.47e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.23e-09,3;UBERON:0006242,2.23e-09,3;UBERON:0007195,5.58e-08,1;UBERON:0001764,7.26e-08,1;UBERON:0001825,7.26e-08,1;UBERON:0001242,2.63e-07,4;UBERON:0001262,2.63e-07,4;UBERON:0004786,2.63e-07,4;UBERON:0004808,2.63e-07,4;UBERON:0001277,2.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05461064305758,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,2.41544127663434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0.871507708151921,0.139423744278603,0,0.227884111694002,0.23056390438806,0.448788222048861,0,0,0,0,0,0,0,0.225595660617181,0.980312671588698,1.00692952185506,0.37950746544837,0,0.210998064528027,1.63232808159148,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870592065804026,0,0.171986032471617,0.387025325156341,0.0730893170861856,0.164230914106418,0,0,0,0.411125773940253,0.993573058514948,0.126621591911757,3.12882212375685,1.44285876452761,0,0.599428828746391,0,0,1.88754497648161,0,0,0,1.9026588850306,2.92887969674533,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,3.38767683921062,3.87354534391482,4.65084452593876,0.492137407573744,0.0846733320657845,0,0.136203406111576,0,0,0.415440338029185,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81926008926669,0,0,0,0,0.197611631897944,0,0,0,0,0,0,2.82697373250422,0,0,0.1251909307065,0,0,0,0,0.874862855734746,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0.516644938982447,0.567515953566836,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,2.45369296252564,0,0,0,0,0,0,0,1.41193548092464,0,5.50004058410987,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0.472775363535873,0,0,0,0.840816489941367,0,0.647782773655864,0,0,0,1.3948971044175,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0.782988022584546,1.76670420507437,1.82876887473404,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,2.35158648180761,0,0,0,0,0,0,0,0,0.399764623699716,2.32120120187355,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,1.09265571963696,2.28057301820587,0.713921808193872,1.3360870263278,0.275684698604535,1.50424523575425,0,0,0,0,0,0.23806443146374,0,0,0.33639558774184,0,0,0,0,0,0.143444410785353,0,0.651226148887796,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr2:78695534..78695542,- | |||
}} | }} |
Latest revision as of 12:29, 29 July 2015
Short description: | p@chr2:78695534..78695542, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:78695534..78695542, - |
Coexpression cluster: | C1914_signet_nonsmall_gall_pancreatic_smallcell_hepatocellular_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.27e-13 | 2 |
epithelial cell | 1.36e-08 | 253 |
lung fibroblast | 5.96e-08 | 1 |
endodermal cell | 1.44e-07 | 58 |
mucus secreting cell | 2.04e-07 | 1 |
intestinal epithelial cell | 2.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.23e-09 | 3 |
gall bladder primordium | 2.23e-09 | 3 |
stroma of bone marrow | 5.58e-08 | 1 |
maxillary sinus | 7.26e-08 | 1 |
paranasal sinus | 7.26e-08 | 1 |
intestinal mucosa | 2.63e-07 | 4 |
wall of intestine | 2.63e-07 | 4 |
gastrointestinal system mucosa | 2.63e-07 | 4 |
gastrointestinal system epithelium | 2.63e-07 | 4 |
intestinal epithelium | 2.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.82e-22 | 106 |
cell type cancer | 1.20e-18 | 143 |
cancer | 3.74e-17 | 235 |
disease of cellular proliferation | 1.09e-16 | 239 |
signet ring cell adenocarcinoma | 2.39e-13 | 2 |
adenocarcinoma | 1.87e-08 | 25 |
islet cell tumor | 4.28e-08 | 1 |
endocrine pancreas cancer | 4.28e-08 | 1 |
pancreatic endocrine carcinoma | 4.28e-08 | 1 |
paranasal sinus cancer | 7.26e-08 | 1 |
maxillary sinus cancer | 7.26e-08 | 1 |
acute leukemia | 9.44e-08 | 1 |
mucinous adenocarcinoma | 2.04e-07 | 1 |
gastrointestinal system cancer | 2.48e-07 | 14 |
skin squamous cell carcinoma | 2.63e-07 | 1 |
keratoacanthoma | 2.63e-07 | 1 |