FFCP PHASE1:Hg19::chr2:9447409..9447421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:9447409..9447421,+ | |||
|description=CAGE_peak_at_chr2:9447409..9447421,+ | |description=CAGE_peak_at_chr2:9447409..9447421,+ | ||
|id=chr2:9447409..9447421,+ | |id=chr2:9447409..9447421,+ | ||
|ontology_enrichment_celltype=CL:0002159!6.57e-13!13;CL:0002621!4.97e-10!3;CL:0002166!5.74e-10!3;CL:0002368!6.48e-10!13;CL:0002541!3.12e-09!3;CL:0002076!2.34e-08!43;CL:0000244!8.07e-07!4;CL:0000731!8.07e-07!4;CL:0000317!8.36e-07!2;CL:1000448!8.36e-07!2;CL:0002308!8.36e-07!2;CL:0002140!8.36e-07!2 | |ontology_enrichment_celltype=CL:0002159!6.57e-13!13;CL:0002621!4.97e-10!3;CL:0002166!5.74e-10!3;CL:0002368!6.48e-10!13;CL:0002541!3.12e-09!3;CL:0002076!2.34e-08!43;CL:0000244!8.07e-07!4;CL:0000731!8.07e-07!4;CL:0000317!8.36e-07!2;CL:1000448!8.36e-07!2;CL:0002308!8.36e-07!2;CL:0002140!8.36e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.31e-34;3!CL:0002166;3.84e-34;3!CL:0002159;9.79e-20;14!CL:0002541;1.53e-15;3!CL:0002076;2.05e-12;42!CL:0002368;3.23e-08;13!CL:0002077;4.10e-07;34!CL:0000317;9.01e-07;2!CL:1000448;9.01e-07;2!CL:0002308;9.01e-07;2!CL:0000575;9.01e-07;2!CL:0002140;9.01e-07;2 | |ontology_enrichment_celltype_v019=CL:0002621;1.31e-34;3!CL:0002166;3.84e-34;3!CL:0002159;9.79e-20;14!CL:0002541;1.53e-15;3!CL:0002076;2.05e-12;42!CL:0002368;3.23e-08;13!CL:0002077;4.10e-07;34!CL:0000317;9.01e-07;2!CL:1000448;9.01e-07;2!CL:0002308;9.01e-07;2!CL:0000575;9.01e-07;2!CL:0002140;9.01e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.24e-34,3;CL:0002166,2.19e-34,3;CL:0002159,8.38e-20,14;CL:0002541,1.65e-15,3;CL:0002076,1.95e-12,42;CL:0000223,7.99e-09,58;CL:0002368,2.89e-08,13;CL:0002077,4.14e-08,34;CL:0000317,9.02e-07,2;CL:1000448,9.02e-07,2;CL:0002308,9.02e-07,2;CL:0002140,9.02e-07,2;CL:0000575,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;2.75e-12;1!DOID:0070004;2.75e-12;1!DOID:4929;9.01e-07;2 | |ontology_enrichment_disease_v019=DOID:4960;2.75e-12;1!DOID:0070004;2.75e-12;1!DOID:4929;9.01e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,4.81e-12,1;DOID:0070004,4.81e-12,1 | |||
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|short_description=p@chr2:9447409..9447421,+ | |short_description=p@chr2:9447409..9447421,+ | ||
}} | }} |
Latest revision as of 13:09, 29 July 2015
Short description: | p@chr2:9447409..9447421, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:9447409..9447421, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.24e-34 | 3 |
epithelial cell of Malassez | 2.19e-34 | 3 |
general ecto-epithelial cell | 8.38e-20 | 14 |
chorionic membrane mesenchymal stem cell | 1.65e-15 | 3 |
endo-epithelial cell | 1.95e-12 | 42 |
endodermal cell | 7.99e-09 | 58 |
respiratory epithelial cell | 2.89e-08 | 13 |
ecto-epithelial cell | 4.14e-08 | 34 |
sebum secreting cell | 9.02e-07 | 2 |
epithelial cell of sweat gland | 9.02e-07 | 2 |
epithelial cell of skin gland | 9.02e-07 | 2 |
acinar cell of sebaceous gland | 9.02e-07 | 2 |
corneal epithelial cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.24e-34 | 3 |
jaw skeleton | 5.61e-26 | 4 |
splanchnocranium | 5.61e-26 | 4 |
primary subdivision of cranial skeletal system | 6.38e-21 | 5 |
protuberance | 1.52e-17 | 6 |
pharyngeal arch | 1.52e-17 | 6 |
embryonic head | 1.52e-17 | 6 |
egg chorion | 1.65e-15 | 3 |
epithelium of mucosa | 2.11e-13 | 8 |
gingiva | 2.11e-13 | 8 |
hepatopancreatic ampulla | 4.31e-12 | 1 |
extrahepatic bile duct | 4.31e-12 | 1 |
common bile duct | 4.31e-12 | 1 |
duodenal papilla | 4.31e-12 | 1 |
cranial skeletal system | 7.86e-10 | 11 |
head | 3.29e-09 | 56 |
mouth mucosa | 1.88e-08 | 13 |
anterior region of body | 2.98e-08 | 62 |
craniocervical region | 2.98e-08 | 62 |
surface structure | 4.97e-08 | 99 |
axial skeletal system | 7.85e-08 | 14 |
chorion | 3.68e-07 | 7 |
subdivision of skeletal system | 6.54e-07 | 16 |
skin gland | 9.02e-07 | 2 |
epidermis gland | 9.02e-07 | 2 |
gland of integumental system | 9.02e-07 | 2 |
sebaceous gland | 9.02e-07 | 2 |
skin sebaceous gland | 9.02e-07 | 2 |
sweat gland | 9.02e-07 | 2 |
sweat gland placode | 9.02e-07 | 2 |
sebaceous gland placode | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.81e-12 | 1 |
myeloma | 4.81e-12 | 1 |