FFCP PHASE1:Hg19::chr3:109629878..109629886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:109629878..109629886,+ | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_at_chr3:109629878..109629886,+ | |description=CAGE_peak_at_chr3:109629878..109629886,+ | ||
|id=chr3:109629878..109629886,+ | |id=chr3:109629878..109629886,+ | ||
|ontology_enrichment_celltype=CL:0002097!4.86e-22!2;CL:0000174!4.94e-15!3;CL:0000077!7.40e-14!19;CL:0000319!5.62e-12!1;CL:1000415!9.96e-07!2 | |ontology_enrichment_celltype=CL:0002097!4.86e-22!2;CL:0000174!4.94e-15!3;CL:0000077!7.40e-14!19;CL:0000319!5.62e-12!1;CL:1000415!9.96e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002097;5.69e-21;2!CL:1000415;5.69e-21;2!CL:0000174;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.66e-21,2;CL:0002097,6.96e-21,2;CL:0000174,2.09e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:170!2.47e-16!6;DOID:3030!5.62e-12!1;DOID:1799!9.61e-12!1;DOID:10165!9.61e-12!1;DOID:1798!9.61e-12!1;DOID:162!1.77e-10!235;DOID:14566!3.29e-10!239;DOID:0050687!8.24e-09!143;DOID:305!1.52e-08!106;DOID:3493!9.44e-07!2 | |ontology_enrichment_disease=DOID:170!2.47e-16!6;DOID:3030!5.62e-12!1;DOID:1799!9.61e-12!1;DOID:10165!9.61e-12!1;DOID:1798!9.61e-12!1;DOID:162!1.77e-10!235;DOID:14566!3.29e-10!239;DOID:0050687!8.24e-09!143;DOID:305!1.52e-08!106;DOID:3493!9.44e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.81e-21;2!DOID:170;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.81e-21,2;DOID:170,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002369!4.94e-15!3;UBERON:0001235!4.94e-15!3;UBERON:0006858!4.94e-15!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.83e-14;3!UBERON:0002110;1.83e-14;3!UBERON:0001235;1.83e-14;3!UBERON:0006858;1.83e-14;3!UBERON:0000945;2.53e-09;5!UBERON:0010039;2.53e-09;5!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.60e-14,3;UBERON:0006242,1.60e-14,3;UBERON:0002369,2.09e-14,3;UBERON:0001235,2.09e-14,3;UBERON:0006858,2.09e-14,3 | |||
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|short_description=p@chr3:109629878..109629886,+ | |short_description=p@chr3:109629878..109629886,+ | ||
}} | }} |
Latest revision as of 14:07, 29 July 2015
Short description: | p@chr3:109629878..109629886, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:109629878..109629886, + |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.66e-21 | 2 |
cortical cell of adrenal gland | 6.96e-21 | 2 |
steroid hormone secreting cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.60e-14 | 3 |
gall bladder primordium | 1.60e-14 | 3 |
adrenal gland | 2.09e-14 | 3 |
adrenal cortex | 2.09e-14 | 3 |
adrenal/interrenal gland | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.81e-21 | 2 |
endocrine gland cancer | 7.25e-08 | 6 |