FFCP PHASE1:Hg19::chr3:115511314..115511328,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:115511314..115511328,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr3:115511314..115511328,- | |||
|id=chr3:115511314..115511328,- | |||
|ontology_enrichment_celltype=CL:0000181!7.49e-12!12;CL:0000417!7.49e-12!12;CL:0000668!7.49e-12!12;CL:0000414!7.49e-12!12;CL:0000412!7.49e-12!12;CL:0000182!7.49e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.74e-27;12!CL:0002581;5.71e-21;1!CL:0002178;5.18e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.34e-27,12;CL:0002581,5.16e-21,1;CL:0000223,2.58e-12,58;CL:0002178,4.84e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.86e-38;13!UBERON:0004161;3.16e-29;11!UBERON:0001041;9.63e-17;30!UBERON:0003104;1.49e-10;31 | |||
|ontology_enrichment_disease=DOID:7!9.69e-17!39;DOID:305!2.02e-15!106;DOID:0050687!5.58e-11!143;DOID:162!4.31e-10!235;DOID:14566!1.00e-09!239;DOID:3493!1.80e-09!2;DOID:4929!2.81e-09!2;DOID:17!1.93e-07!5;DOID:450!1.93e-07!5;DOID:66!1.93e-07!5;DOID:423!1.93e-07!5;DOID:0080000!1.93e-07!5;DOID:11722!1.93e-07!5;DOID:299!5.31e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.82e-40;2!DOID:7;5.76e-12;39!DOID:4929;3.52e-11;2!DOID:299;9.02e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.01e-40,2;DOID:7,5.95e-13,39;DOID:305,1.12e-11,106;DOID:4929,3.70e-11,2;DOID:0050687,1.51e-08,143;DOID:299,9.24e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.82e-17!25;UBERON:0000015!1.82e-17!25;UBERON:0002423!1.82e-17!25;UBERON:0006235!1.82e-17!25;UBERON:0004161!1.82e-17!25;UBERON:0002294!2.79e-14!7;UBERON:0001173!2.79e-14!7;UBERON:0004912!2.79e-14!7;UBERON:0008835!1.33e-13!22;UBERON:0003894!1.33e-13!22;UBERON:0009854!6.22e-13!23;UBERON:0007499!9.32e-12!25;UBERON:0009856!3.08e-11!26;UBERON:0002394!5.74e-10!4;UBERON:0003928!5.74e-10!4;UBERON:0003929!1.23e-09!54;UBERON:0005172!1.14e-07!55;UBERON:0005173!1.14e-07!55;UBERON:0005911!1.92e-07!82;UBERON:0002107!3.24e-07!19;UBERON:0006925!3.24e-07!19;UBERON:0008836!3.24e-07!19;UBERON:0000466!9.08e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.78e-20;25!UBERON:0002107;3.92e-17;19!UBERON:0006925;3.92e-17;19!UBERON:0005406;3.52e-11;2!UBERON:0000949;2.63e-10;43!UBERON:0002365;4.02e-10;31!UBERON:0002330;4.02e-10;31!UBERON:0002368;3.08e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,8.36e-23,22;UBERON:0003894,8.36e-23,22;UBERON:0009854,7.98e-22,23;UBERON:0007499,4.25e-20,25;UBERON:0009497,4.25e-20,25;UBERON:0000015,4.25e-20,25;UBERON:0002423,4.25e-20,25;UBERON:0006235,4.25e-20,25;UBERON:0004161,4.25e-20,25;UBERON:0009856,2.47e-19,26;UBERON:0002107,3.46e-17,19;UBERON:0006925,3.46e-17,19;UBERON:0008836,3.46e-17,19;UBERON:0005406,3.35e-11,2;UBERON:0000949,3.40e-11,45;UBERON:0002365,1.09e-10,31;UBERON:0002330,1.09e-10,31;UBERON:0002368,1.67e-09,35;UBERON:0003929,2.19e-09,54;UBERON:0001041,3.35e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0.898683511473268,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0.426905989478705,0,0.432271251462318,0,0,0,0.124252535565433,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.6544468284517,1.81314888438566,3.30277364885506,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94450700845729,1.21917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,1.43720323370539,0,0,0,0,0,0 | |||
|short_description=p@chr3:115511314..115511328,- | |||
}} |
Latest revision as of 14:36, 29 July 2015
Short description: | p@chr3:115511314..115511328, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:115511314..115511328, - |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.34e-27 | 12 |
perirenal preadipocyte | 5.16e-21 | 1 |
endodermal cell | 2.58e-12 | 58 |
epithelial cell of stomach | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 8.36e-23 | 22 |
liver primordium | 8.36e-23 | 22 |
digestive tract diverticulum | 7.98e-22 | 23 |
epithelial sac | 4.25e-20 | 25 |
epithelium of foregut-midgut junction | 4.25e-20 | 25 |
anatomical boundary | 4.25e-20 | 25 |
hepatobiliary system | 4.25e-20 | 25 |
foregut-midgut junction | 4.25e-20 | 25 |
septum transversum | 4.25e-20 | 25 |
sac | 2.47e-19 | 26 |
liver | 3.46e-17 | 19 |
digestive gland | 3.46e-17 | 19 |
liver bud | 3.46e-17 | 19 |
perirenal fat | 3.35e-11 | 2 |
endocrine system | 3.40e-11 | 45 |
exocrine gland | 1.09e-10 | 31 |
exocrine system | 1.09e-10 | 31 |
endocrine gland | 1.67e-09 | 35 |
gut epithelium | 2.19e-09 | 54 |
foregut | 3.35e-08 | 87 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.01e-40 | 2 |
disease of anatomical entity | 5.95e-13 | 39 |
carcinoma | 1.12e-11 | 106 |
tubular adenocarcinoma | 3.70e-11 | 2 |
cell type cancer | 1.51e-08 | 143 |
adenocarcinoma | 9.24e-08 | 25 |