FFCP PHASE1:Hg19::chr3:172384246..172384250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:172384246..172384250,+ | |||
|description=CAGE_peak_at_chr3:172384246..172384250,+ | |description=CAGE_peak_at_chr3:172384246..172384250,+ | ||
|id=chr3:172384246..172384250,+ | |id=chr3:172384246..172384250,+ | ||
|ontology_enrichment_celltype=CL:0000064!4.83e-13!3;CL:0005012!4.83e-13!3;CL:0000067!4.83e-13!3;CL:0002304!4.83e-13!3;CL:0000077!6.48e-10!19;CL:0000066!3.31e-07!254 | |ontology_enrichment_celltype=CL:0000064!4.83e-13!3;CL:0005012!4.83e-13!3;CL:0000067!4.83e-13!3;CL:0002304!4.83e-13!3;CL:0000077!6.48e-10!19;CL:0000066!3.31e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000650;8.97e-41;2!CL:1000500;8.97e-41;2!CL:1000618;8.97e-41;2!CL:1001318;8.97e-41;2!CL:0002173;8.97e-41;2!CL:0000669;5.72e-21;4!CL:1000507;1.53e-18;10!CL:1000494;1.53e-18;10!CL:0000077;3.46e-17;19!CL:0002681;1.42e-15;12!CL:0002584;1.42e-15;12!CL:1000449;1.35e-12;15!CL:1000746;2.00e-12;7!CL:1000612;2.00e-12;7!CL:1000497;3.43e-11;17!CL:0002518;3.43e-11;17!CL:0002097;3.70e-11;2!CL:0000064;7.25e-08;3!CL:0000174;7.25e-08;3!CL:0000067;7.25e-08;3!CL:0005012;7.25e-08;3!CL:0002304;7.25e-08;3!CL:0002621;7.25e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.10e-40,2;CL:1000500,1.10e-40,2;CL:1000618,1.10e-40,2;CL:1001318,1.10e-40,2;CL:0002173,1.10e-40,2;CL:0000669,6.33e-21,4;CL:1000507,1.63e-18,10;CL:1000494,1.63e-18,10;CL:0000077,3.18e-17,19;CL:0002681,1.50e-15,12;CL:0002584,1.50e-15,12;CL:1000449,1.41e-12,15;CL:1000746,2.12e-12,7;CL:1000612,2.12e-12,7;CL:0002097,3.35e-11,2;CL:1000497,3.55e-11,17;CL:0002518,3.55e-11,17;CL:0000174,6.78e-08,3;CL:0002621,7.76e-08,3;CL:0000064,8.29e-08,3;CL:0000067,8.29e-08,3;CL:0005012,8.29e-08,3;CL:0002304,8.29e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!1.97e-16!4;UBERON:0001778!4.83e-13!3;UBERON:0001775!4.83e-13!3;UBERON:0002203!5.58e-11!6;UBERON:0001768!5.58e-11!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;8.97e-41;2!UBERON:0003838;8.97e-41;2!UBERON:0003586;8.97e-41;2!UBERON:0005169;8.97e-41;2!UBERON:0002321;8.97e-41;2!UBERON:0005215;8.97e-41;2!UBERON:0002303;8.97e-41;2!UBERON:0002319;8.97e-41;2!UBERON:0001851;1.75e-21;15!UBERON:0003891;5.72e-21;4!UBERON:0004211;1.53e-18;10!UBERON:0009773;1.53e-18;10!UBERON:0001231;1.53e-18;10!UBERON:0004810;1.53e-18;10!UBERON:0001225;1.42e-15;12!UBERON:0008987;1.42e-15;12!UBERON:0006555;1.35e-12;15!UBERON:0000353;1.35e-12;15!UBERON:0004819;1.35e-12;15!UBERON:0001285;1.35e-12;15!UBERON:0007684;1.35e-12;15!UBERON:0000074;2.00e-12;7!UBERON:0001229;2.00e-12;7!UBERON:0002113;4.20e-08;24!UBERON:0011143;4.20e-08;24!UBERON:0002369;7.25e-08;3!UBERON:0001235;7.25e-08;3!UBERON:0006858;7.25e-08;3!UBERON:0001778;7.25e-08;3!UBERON:0001949;7.25e-08;3!UBERON:0001775;7.25e-08;3!UBERON:0000489;8.42e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.10e-40,2;UBERON:0003838,1.10e-40,2;UBERON:0003586,1.10e-40,2;UBERON:0005169,1.10e-40,2;UBERON:0002321,1.10e-40,2;UBERON:0005215,1.10e-40,2;UBERON:0002303,1.10e-40,2;UBERON:0002319,1.10e-40,2;UBERON:0001851,1.75e-21,15;UBERON:0003891,6.33e-21,4;UBERON:0004810,1.63e-18,10;UBERON:0001225,1.50e-15,12;UBERON:0008987,1.50e-15,12;UBERON:0004211,1.41e-12,15;UBERON:0009773,1.41e-12,15;UBERON:0000353,1.41e-12,15;UBERON:0001231,1.41e-12,15;UBERON:0001285,1.41e-12,15;UBERON:0007684,1.41e-12,15;UBERON:0004208,1.41e-12,15;UBERON:0010532,2.12e-12,7;UBERON:0000074,2.12e-12,7;UBERON:0001229,2.12e-12,7;UBERON:0001230,2.12e-12,7;UBERON:0003220,2.12e-12,7;UBERON:0005749,2.12e-12,7;UBERON:0004199,2.12e-12,7;UBERON:0004209,2.12e-12,7;UBERON:0004198,2.12e-12,7;UBERON:0006555,7.81e-12,16;UBERON:0004819,7.81e-12,16;UBERON:0005103,5.69e-11,8;UBERON:0000083,5.69e-11,8;UBERON:0009201,5.69e-11,8;UBERON:0006553,5.69e-11,8;UBERON:0003074,5.69e-11,8;UBERON:0003060,5.69e-11,8;UBERON:0000058,4.30e-10,19;UBERON:0000080,7.41e-10,9;UBERON:0002120,7.41e-10,9;UBERON:0004875,7.41e-10,9;UBERON:0005721,7.41e-10,9;UBERON:0005754,7.41e-10,9;UBERON:0007297,7.41e-10,9;UBERON:0004876,3.14e-08,11;UBERON:0002369,6.78e-08,3;UBERON:0001235,6.78e-08,3;UBERON:0006858,6.78e-08,3;UBERON:0001949,7.76e-08,3;UBERON:0001778,8.29e-08,3;UBERON:0001775,8.29e-08,3;UBERON:0003887,1.29e-07,12;UBERON:0002113,1.63e-07,26;UBERON:0003918,1.63e-07,26;UBERON:0011143,1.63e-07,26;UBERON:0005095,1.63e-07,26;UBERON:0007687,1.63e-07,26;UBERON:0003064,5.03e-07,28 | |||
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| ||
|short_description=p@chr3:172384246..172384250,+ | |short_description=p@chr3:172384246..172384250,+ | ||
}} | }} |
Latest revision as of 18:20, 29 July 2015
Short description: | p@chr3:172384246..172384250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:172384246..172384250, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.10e-40 | 2 |
kidney interstitial cell | 1.10e-40 | 2 |
juxtaglomerular complex cell | 1.10e-40 | 2 |
renal interstitial pericyte | 1.10e-40 | 2 |
extraglomerular mesangial cell | 1.10e-40 | 2 |
pericyte cell | 6.33e-21 | 4 |
kidney tubule cell | 1.63e-18 | 10 |
nephron tubule epithelial cell | 1.63e-18 | 10 |
mesothelial cell | 3.18e-17 | 19 |
kidney cortical cell | 1.50e-15 | 12 |
renal cortical epithelial cell | 1.50e-15 | 12 |
epithelial cell of nephron | 1.41e-12 | 15 |
glomerular cell | 2.12e-12 | 7 |
kidney corpuscule cell | 2.12e-12 | 7 |
cortical cell of adrenal gland | 3.35e-11 | 2 |
kidney cell | 3.55e-11 | 17 |
kidney epithelial cell | 3.55e-11 | 17 |
steroid hormone secreting cell | 6.78e-08 | 3 |
gingival epithelial cell | 7.76e-08 | 3 |
ciliated cell | 8.29e-08 | 3 |
ciliated epithelial cell | 8.29e-08 | 3 |
multi-ciliated epithelial cell | 8.29e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.29e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |