FFCP PHASE1:Hg19::chr3:195802025..195802031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:195802025..195802031,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr3:195802025..195802031,- | |description=CAGE_peak_at_chr3:195802025..195802031,- | ||
|id=chr3:195802025..195802031,- | |id=chr3:195802025..195802031,- | ||
|ontology_enrichment_celltype=CL:0000988!7.22e-17!182;CL:0000037!1.07e-16!172;CL:0000566!1.07e-16!172;CL:0002032!4.26e-16!165;CL:0000837!4.26e-16!165;CL:0000542!2.16e-10!53;CL:0000051!2.16e-10!53;CL:0000838!1.17e-09!52;CL:0002087!4.14e-09!119;CL:0002031!5.51e-09!124;CL:0000738!7.92e-08!140;CL:0000763!3.24e-07!112;CL:0000049!3.24e-07!112;CL:0000945!5.31e-07!24;CL:0000826!5.31e-07!24 | |ontology_enrichment_celltype=CL:0000988!7.22e-17!182;CL:0000037!1.07e-16!172;CL:0000566!1.07e-16!172;CL:0002032!4.26e-16!165;CL:0000837!4.26e-16!165;CL:0000542!2.16e-10!53;CL:0000051!2.16e-10!53;CL:0000838!1.17e-09!52;CL:0002087!4.14e-09!119;CL:0002031!5.51e-09!124;CL:0000738!7.92e-08!140;CL:0000763!3.24e-07!112;CL:0000049!3.24e-07!112;CL:0000945!5.31e-07!24;CL:0000826!5.31e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.99e-41;2!CL:0000558;3.99e-41;2!CL:0002262;3.34e-11;2!CL:1000398;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.99e-41,2;CL:0000765,3.99e-41,2;CL:0000050,3.99e-41,2;CL:0000038,3.99e-41,2;CL:0000558,3.99e-41,2;CL:0000547,3.99e-41,2;CL:0000549,3.99e-41,2;CL:0000550,3.99e-41,2;CL:0000552,3.99e-41,2;CL:0002262,2.73e-11,2;CL:1000398,2.73e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.40e-25!235;DOID:14566!4.46e-25!239;DOID:2531!3.13e-23!51;DOID:0060083!3.13e-23!51;DOID:0050686!9.23e-17!137;DOID:1240!6.45e-16!39;DOID:305!8.77e-12!106;DOID:0050687!2.94e-11!143;DOID:0060058!4.42e-11!10;DOID:8692!1.58e-10!31 | |ontology_enrichment_disease=DOID:162!1.40e-25!235;DOID:14566!4.46e-25!239;DOID:2531!3.13e-23!51;DOID:0060083!3.13e-23!51;DOID:0050686!9.23e-17!137;DOID:1240!6.45e-16!39;DOID:305!8.77e-12!106;DOID:0050687!2.94e-11!143;DOID:0060058!4.42e-11!10;DOID:8692!1.58e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.02e-11,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.34e-11;2!UBERON:0003497;3.34e-11;2!UBERON:0003909;3.34e-11;2!UBERON:0003835;3.34e-11;2!UBERON:0002106;6.78e-08;3!UBERON:0001280;6.78e-08;3!UBERON:0004647;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.73e-11,2;UBERON:0003497,2.73e-11,2;UBERON:0003909,2.73e-11,2;UBERON:0003835,2.73e-11,2;UBERON:0001280,5.93e-08,3;UBERON:0004647,5.93e-08,3;UBERON:0005171,5.93e-08,3;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3 | |||
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| ||
|short_description=p@chr3:195802025..195802031,- | |short_description=p@chr3:195802025..195802031,- | ||
}} | }} |
Latest revision as of 19:47, 29 July 2015
Short description: | p@chr3:195802025..195802031, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:195802025..195802031, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.99e-41 | 2 |
erythroblast | 3.99e-41 | 2 |
megakaryocyte-erythroid progenitor cell | 3.99e-41 | 2 |
erythroid progenitor cell | 3.99e-41 | 2 |
reticulocyte | 3.99e-41 | 2 |
proerythroblast | 3.99e-41 | 2 |
basophilic erythroblast | 3.99e-41 | 2 |
polychromatophilic erythroblast | 3.99e-41 | 2 |
orthochromatic erythroblast | 3.99e-41 | 2 |
endothelial cell of sinusoid | 2.73e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.73e-11 | 2 |
abdomen blood vessel | 2.73e-11 | 2 |
sinusoid | 2.73e-11 | 2 |
abdominal segment blood vessel | 2.73e-11 | 2 |
liver parenchyma | 5.93e-08 | 3 |
liver lobule | 5.93e-08 | 3 |
hepatic duct | 5.93e-08 | 3 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.02e-11 | 2 |