FFCP PHASE1:Hg19::chr3:37204870..37204881,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:37204870..37204881,- | |||
|description=CAGE_peak_at_chr3:37204870..37204881,- | |||
|id=chr3:37204870..37204881,- | |||
|ontology_enrichment_celltype=CL:0000055!6.35e-16!180;CL:0002552!2.62e-14!5;CL:0000057!2.64e-13!75;CL:0002551!1.08e-11!6;CL:0002556!1.15e-11!6;CL:0000594!7.30e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002559;1.62e-18;5!CL:0002556;9.04e-16;6!CL:0002561;2.59e-12;2!CL:0002363;2.59e-12;2!CL:0002573;1.21e-08;2!CL:0000346;1.21e-08;3!CL:1000428;1.21e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.24e-18,5;CL:0002556,7.23e-16,6;CL:0002561,2.32e-12,2;CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0000346,1.04e-08,3;CL:1000428,1.04e-08,3;CL:0002573,1.40e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.59e-12;2 | |||
|ontology_enrichment_disease=DOID:3350!9.35e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:6193;3.28e-23;1!DOID:3350;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.10e-23,1;DOID:3350,2.90e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001828!3.18e-16!8;UBERON:0003102!5.35e-15!95;UBERON:0001758!1.15e-11!6;UBERON:0003672!1.15e-11!6;UBERON:0000165!1.25e-11!28;UBERON:0000930!1.25e-11!28;UBERON:0002067!5.92e-11!9;UBERON:0004016!5.92e-11!9;UBERON:0010083!5.92e-11!9;UBERON:0000914!8.76e-11!83;UBERON:0002329!8.76e-11!83;UBERON:0003077!8.76e-11!83;UBERON:0003059!8.76e-11!83;UBERON:0007282!8.76e-11!83;UBERON:0009618!8.76e-11!83;UBERON:0007285!8.76e-11!83;UBERON:0000075!2.91e-09!13;UBERON:0005944!2.91e-09!13;UBERON:0004288!2.91e-09!13;UBERON:0003089!2.91e-09!13;UBERON:0003129!1.82e-08!11;UBERON:0001444!4.91e-08!48;UBERON:0002199!2.72e-07!45;UBERON:0002416!2.72e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.62e-18;5!UBERON:0001758;9.04e-16;6!UBERON:0003672;9.04e-16;6!UBERON:0003129;1.15e-13;7!UBERON:0003566;2.59e-12;2!UBERON:0005933;2.59e-12;2!UBERON:0001777;2.59e-12;2!UBERON:0005942;2.59e-12;2!UBERON:0005932;2.59e-12;2!UBERON:0011137;4.80e-09;11!UBERON:0010323;4.80e-09;11!UBERON:0000412;1.21e-08;3!UBERON:0001992;1.21e-08;3!UBERON:0000165;8.39e-08;28!UBERON:0001444;9.77e-08;48!UBERON:0001003;8.33e-07;15!UBERON:0007376;8.33e-07;15!UBERON:0003891;8.61e-07;4!UBERON:0000964;8.61e-07;4!UBERON:0010409;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.24e-18,5;UBERON:0005086,1.24e-18,5;UBERON:0001758,7.23e-16,6;UBERON:0003672,7.23e-16,6;UBERON:0003129,9.53e-14,7;UBERON:0005933,2.32e-12,2;UBERON:0005942,2.32e-12,2;UBERON:0005932,2.32e-12,2;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0010323,4.25e-09,11;UBERON:0000412,1.04e-08,3;UBERON:0001992,1.04e-08,3;UBERON:0003102,4.84e-08,99;UBERON:0001444,1.26e-07,49;UBERON:0000165,1.39e-07,29;UBERON:0000930,1.39e-07,29;UBERON:0011137,2.44e-07,14;UBERON:0005085,5.08e-07,31;UBERON:0001003,7.63e-07,15;UBERON:0007376,7.63e-07,15;UBERON:0007383,7.63e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0,0,0,0,0,0.286235987131057,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.597794722207204,0.939475989150119,0.485618833104395,0.421352420106746,0.61246251376468,0.737005903870608,0.206651562351531,2.37600571456411,0.494533858557114,0,0,3.03005005117319,0.250237039743928,1.6623846929051,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0.721367704669072,0,0.37223371266318,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0.763976851116555,0,0,0.102827492703324,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06498800657509,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:37204870..37204881,- | |||
}} | }} |
Latest revision as of 20:41, 29 July 2015
Short description: | p@chr3:37204870..37204881, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:37204870..37204881, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.24e-18 | 5 |
fibroblast of periodontium | 7.23e-16 | 6 |
outer root sheath cell | 2.32e-12 | 2 |
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
hair follicle dermal papilla cell | 1.04e-08 | 3 |
stem cell of epidermis | 1.04e-08 | 3 |
Schwann cell | 1.40e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.24e-18 | 5 |
hair follicle placode | 1.24e-18 | 5 |
periodontium | 7.23e-16 | 6 |
dentition | 7.23e-16 | 6 |
skull | 9.53e-14 | 7 |
hair root sheath | 2.32e-12 | 2 |
hair outer root sheath | 2.32e-12 | 2 |
bulb of hair follicle | 2.32e-12 | 2 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
cranial skeletal system | 4.25e-09 | 11 |
dermal papilla | 1.04e-08 | 3 |
papillary layer of dermis | 1.04e-08 | 3 |
surface structure | 4.84e-08 | 99 |
subdivision of head | 1.26e-07 | 49 |
mouth | 1.39e-07 | 29 |
stomodeum | 1.39e-07 | 29 |
axial skeletal system | 2.44e-07 | 14 |
ectodermal placode | 5.08e-07 | 31 |
skin epidermis | 7.63e-07 | 15 |
outer epithelium | 7.63e-07 | 15 |
enveloping layer of ectoderm | 7.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.10e-23 | 1 |
mesenchymal cell neoplasm | 2.90e-12 | 2 |