FFCP PHASE1:Hg19::chr3:47155553..47155568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:47155553..47155568,- | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_at_chr3:47155553..47155568,- | |description=CAGE_peak_at_chr3:47155553..47155568,- | ||
|id=chr3:47155553..47155568,- | |id=chr3:47155553..47155568,- | ||
|ontology_enrichment_celltype=CL:0002166!4.98e-12!3;CL:0002621!7.10e-12!3;CL:0002159!1.27e-09!13;CL:0000240!1.50e-09!6;CL:0000311!1.50e-09!6;CL:0000079!1.50e-09!6;CL:0000237!1.50e-09!6;CL:0000036!1.50e-09!6;CL:0000357!1.50e-09!6;CL:0000114!1.50e-09!6;CL:0000312!4.99e-07!5;CL:0000221!6.14e-07!71;CL:0002077!7.82e-07!33 | |ontology_enrichment_celltype=CL:0002166!4.98e-12!3;CL:0002621!7.10e-12!3;CL:0002159!1.27e-09!13;CL:0000240!1.50e-09!6;CL:0000311!1.50e-09!6;CL:0000079!1.50e-09!6;CL:0000237!1.50e-09!6;CL:0000036!1.50e-09!6;CL:0000357!1.50e-09!6;CL:0000114!1.50e-09!6;CL:0000312!4.99e-07!5;CL:0000221!6.14e-07!71;CL:0002077!7.82e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.28e-84;3!CL:0002621;2.64e-38;3!CL:0002159;1.23e-32;14!CL:0002077;2.21e-12;34!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.21e-85,3;CL:0002621,3.19e-38,3;CL:0002159,1.14e-32,14;CL:0002077,8.03e-14,34;CL:0000312,6.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!7.10e-12!3;UBERON:0003129!5.33e-11!11;UBERON:0000075!3.41e-09!13;UBERON:0005944!3.41e-09!13;UBERON:0004288!3.41e-09!13;UBERON:0003089!3.41e-09!13;UBERON:0001708!4.14e-09!4;UBERON:0001704!4.14e-09!4;UBERON:0001828!2.19e-07!8;UBERON:0003102!3.91e-07!95 | |ontology_enrichment_uberon=UBERON:0001949!7.10e-12!3;UBERON:0003129!5.33e-11!11;UBERON:0000075!3.41e-09!13;UBERON:0005944!3.41e-09!13;UBERON:0004288!3.41e-09!13;UBERON:0003089!3.41e-09!13;UBERON:0001708!4.14e-09!4;UBERON:0001704!4.14e-09!4;UBERON:0001828!2.19e-07!8;UBERON:0003102!3.91e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;9.50e-64;4!UBERON:0008895;9.50e-64;4!UBERON:0011159;3.24e-51;5!UBERON:0001949;2.64e-38;3!UBERON:0011137;8.34e-24;11!UBERON:0010323;8.34e-24;11!UBERON:0003929;4.36e-17;7!UBERON:0000075;1.25e-16;16!UBERON:0003350;4.37e-15;8!UBERON:0001828;4.37e-15;8!UBERON:0004765;1.60e-10;26!UBERON:0000486;2.13e-10;12!UBERON:0003729;1.13e-09;13!UBERON:0010371;3.56e-09;31!UBERON:0001434;7.36e-08;36!UBERON:0000161;6.57e-07;19!UBERON:0000166;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.18e-64,4;UBERON:0008895,6.18e-64,4;UBERON:0011159,2.30e-51,5;UBERON:0010188,5.62e-43,6;UBERON:0002539,5.62e-43,6;UBERON:0008816,5.62e-43,6;UBERON:0001949,3.19e-38,3;UBERON:0010323,7.14e-24,11;UBERON:0011137,6.09e-19,14;UBERON:0000075,1.12e-16,16;UBERON:0003350,4.69e-15,8;UBERON:0001828,4.69e-15,8;UBERON:0008814,6.53e-15,18;UBERON:0000033,5.74e-13,56;UBERON:0000153,9.55e-12,62;UBERON:0007811,9.55e-12,62;UBERON:0003102,1.65e-10,99;UBERON:0003729,1.18e-09,13 | |||
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| ||
|short_description=p@chr3:47155553..47155568,- | |short_description=p@chr3:47155553..47155568,- | ||
}} | }} |
Latest revision as of 21:31, 29 July 2015
Short description: | p@chr3:47155553..47155568, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:47155553..47155568, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.21e-85 | 3 |
gingival epithelial cell | 3.19e-38 | 3 |
general ecto-epithelial cell | 1.14e-32 | 14 |
ecto-epithelial cell | 8.03e-14 | 34 |
keratinocyte | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 6.18e-64 | 4 |
splanchnocranium | 6.18e-64 | 4 |
primary subdivision of cranial skeletal system | 2.30e-51 | 5 |
protuberance | 5.62e-43 | 6 |
pharyngeal arch | 5.62e-43 | 6 |
embryonic head | 5.62e-43 | 6 |
gingival epithelium | 3.19e-38 | 3 |
cranial skeletal system | 7.14e-24 | 11 |
axial skeletal system | 6.09e-19 | 14 |
subdivision of skeletal system | 1.12e-16 | 16 |
epithelium of mucosa | 4.69e-15 | 8 |
gingiva | 4.69e-15 | 8 |
pharyngeal arch system | 6.53e-15 | 18 |
head | 5.74e-13 | 56 |
anterior region of body | 9.55e-12 | 62 |
craniocervical region | 9.55e-12 | 62 |
surface structure | 1.65e-10 | 99 |
mouth mucosa | 1.18e-09 | 13 |