FFCP PHASE1:Hg19::chr3:53778605..53778645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:53778605..53778645,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr3:53778605..53778645,+ | |description=CAGE_peak_at_chr3:53778605..53778645,+ | ||
|id=chr3:53778605..53778645,+ | |id=chr3:53778605..53778645,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.52e-15!53;CL:0000051!5.52e-15!53;CL:0000838!2.57e-13!52;CL:0000945!9.91e-12!24;CL:0000826!9.91e-12!24;CL:0000242!5.01e-09!2;CL:0002087!3.94e-07!119 | |ontology_enrichment_celltype=CL:0000542!5.52e-15!53;CL:0000051!5.52e-15!53;CL:0000838!2.57e-13!52;CL:0000945!9.91e-12!24;CL:0000826!9.91e-12!24;CL:0000242!5.01e-09!2;CL:0002087!3.94e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.21e-16;24!CL:0000167;2.91e-12;1!CL:0000164;2.91e-12;1!CL:0000502;2.91e-12;1!CL:0000172;2.91e-12;1!CL:0000173;2.91e-12;1!CL:0000840;2.52e-08;5!CL:0000123;5.41e-07;2!CL:0000242;5.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.13e-16,24;CL:0000826,2.13e-16,24;CL:0000542,1.46e-12,53;CL:0000051,1.46e-12,53;CL:0000167,2.20e-12,1;CL:0000164,2.20e-12,1;CL:0000502,2.20e-12,1;CL:0000172,2.20e-12,1;CL:0000173,2.20e-12,1;CL:0002351,2.20e-12,1;CL:0000838,6.41e-10,52;CL:0000840,2.71e-08,5;CL:0001029,2.71e-08,5;CL:0002087,3.07e-08,115;CL:0000242,5.41e-07,2;CL:0000738,9.17e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002351;2.91e-12;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.32e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;1.32e-12;1!DOID:0050177;1.32e-12;1!DOID:4960;1.32e-12;1!DOID:0070004;1.32e-12;1!DOID:0050427;1.32e-12;1!DOID:12603;2.91e-12;1!DOID:4430;2.91e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.11e-12,1;DOID:0050177,1.11e-12,1;DOID:0050427,1.11e-12,1;DOID:4960,1.57e-12,1;DOID:0070004,1.57e-12,1;DOID:4430,2.20e-12,1;DOID:12603,4.81e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.53e-17!7;UBERON:0002106!4.20e-11!3;UBERON:0004854!4.20e-11!3;UBERON:0009034!4.20e-11!3;UBERON:0002095!4.20e-11!3;UBERON:0004782!4.20e-11!3;UBERON:0003281!4.20e-11!3;UBERON:0009664!4.20e-11!3;UBERON:0002296!4.20e-11!3;UBERON:0005602!4.20e-11!3;UBERON:0001179!4.20e-11!3;UBERON:0006293!4.20e-11!3;UBERON:0000007!8.98e-09!2;UBERON:0002370!1.67e-08!4;UBERON:0005058!1.67e-08!4;UBERON:0009113!1.67e-08!4;UBERON:0003295!1.67e-08!4;UBERON:0005562!1.67e-08!4;UBERON:0000945!3.41e-07!8;UBERON:0010039!3.41e-07!8 | |ontology_enrichment_uberon=UBERON:0004177!1.53e-17!7;UBERON:0002106!4.20e-11!3;UBERON:0004854!4.20e-11!3;UBERON:0009034!4.20e-11!3;UBERON:0002095!4.20e-11!3;UBERON:0004782!4.20e-11!3;UBERON:0003281!4.20e-11!3;UBERON:0009664!4.20e-11!3;UBERON:0002296!4.20e-11!3;UBERON:0005602!4.20e-11!3;UBERON:0001179!4.20e-11!3;UBERON:0006293!4.20e-11!3;UBERON:0000007!8.98e-09!2;UBERON:0002370!1.67e-08!4;UBERON:0005058!1.67e-08!4;UBERON:0009113!1.67e-08!4;UBERON:0003295!1.67e-08!4;UBERON:0005562!1.67e-08!4;UBERON:0000945!3.41e-07!8;UBERON:0010039!3.41e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr3:53778605..53778645,+ | |short_description=p@chr3:53778605..53778645,+ | ||
}} | }} |
Latest revision as of 22:36, 29 July 2015
Short description: | p@chr3:53778605..53778645, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:53778605..53778645, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.13e-16 | 24 |
pro-B cell | 2.13e-16 | 24 |
lymphocyte | 1.46e-12 | 53 |
common lymphoid progenitor | 1.46e-12 | 53 |
peptide hormone secreting cell | 2.20e-12 | 1 |
enteroendocrine cell | 2.20e-12 | 1 |
type D enteroendocrine cell | 2.20e-12 | 1 |
somatostatin secreting cell | 2.20e-12 | 1 |
pancreatic D cell | 2.20e-12 | 1 |
progenitor cell of endocrine pancreas | 2.20e-12 | 1 |
lymphoid lineage restricted progenitor cell | 6.41e-10 | 52 |
immature conventional dendritic cell | 2.71e-08 | 5 |
common dendritic progenitor | 2.71e-08 | 5 |
nongranular leukocyte | 3.07e-08 | 115 |
Merkel cell | 5.41e-07 | 2 |
leukocyte | 9.17e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.11e-12 | 1 |
monogenic disease | 1.11e-12 | 1 |
xeroderma pigmentosum | 1.11e-12 | 1 |
bone marrow cancer | 1.57e-12 | 1 |
myeloma | 1.57e-12 | 1 |
somatostatinoma | 2.20e-12 | 1 |
acute leukemia | 4.81e-12 | 1 |