FFCP PHASE1:Hg19::chr3:55513517..55513530,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:55513517..55513530,- | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_at_chr3:55513517..55513530,- | |description=CAGE_peak_at_chr3:55513517..55513530,- | ||
|id=chr3:55513517..55513530,- | |id=chr3:55513517..55513530,- | ||
|ontology_enrichment_celltype=CL:0002537!2.45e-13!5;CL:0002620!4.00e-10!23;CL:0000349!3.52e-09!3;CL:0002577!3.52e-09!3;CL:0000057!2.07e-08!75;CL:0000064!2.04e-07!3;CL:0005012!2.04e-07!3;CL:0000067!2.04e-07!3;CL:0002304!2.04e-07!3;CL:0000197!3.06e-07!6;CL:0000098!3.06e-07!6;CL:0002167!3.06e-07!6;CL:0000055!9.30e-07!180 | |ontology_enrichment_celltype=CL:0002537!2.45e-13!5;CL:0002620!4.00e-10!23;CL:0000349!3.52e-09!3;CL:0002577!3.52e-09!3;CL:0000057!2.07e-08!75;CL:0000064!2.04e-07!3;CL:0005012!2.04e-07!3;CL:0000067!2.04e-07!3;CL:0002304!2.04e-07!3;CL:0000197!3.06e-07!6;CL:0000098!3.06e-07!6;CL:0002167!3.06e-07!6;CL:0000055!9.30e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.80e-46;19!CL:0002577;2.74e-34;3!CL:0002536;1.68e-23;2!CL:0002537;1.25e-20;5!CL:0000197;3.50e-08;6!CL:0000098;3.50e-08;6!CL:0002167;3.50e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.00e-46,19;CL:0002577,2.19e-34,3;CL:0002536,2.23e-23,2;CL:0002537,1.43e-20,5;CL:0000197,3.02e-08,6;CL:0000098,3.02e-08,6;CL:0002167,3.02e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.20e-08!5;DOID:450!4.20e-08!5;DOID:66!4.20e-08!5;DOID:423!4.20e-08!5;DOID:0080000!4.20e-08!5;DOID:11722!4.20e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.98e-30!14;UBERON:0000158!6.98e-30!14;UBERON:0000305!2.82e-18!7;UBERON:0000478!6.20e-16!24;UBERON:0004871!7.91e-16!8;UBERON:0003124!1.82e-13!7;UBERON:0001987!5.00e-11!4;UBERON:0004340!5.00e-11!4;UBERON:0000488!2.75e-09!4;UBERON:0001778!2.04e-07!3;UBERON:0001775!2.04e-07!3;UBERON:0002199!5.83e-07!45;UBERON:0002416!5.83e-07!45;UBERON:0007625!8.22e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.42e-40;10!UBERON:0000158;8.42e-40;10!UBERON:0000305;9.93e-40;7!UBERON:0000478;1.35e-36;24!UBERON:0001987;6.64e-26;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.56e-63,14;UBERON:0000158,2.56e-63,14;UBERON:0000305,1.42e-39,7;UBERON:0000478,1.47e-36,24;UBERON:0004871,1.21e-34,8;UBERON:0003124,4.89e-26,7;UBERON:0001987,5.61e-26,4;UBERON:0004340,5.61e-26,4;UBERON:0004923,1.42e-15,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.02415155899396,2.37390280405608,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0,0.831192346452549,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,1.06778694409284,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,2.39344304926383,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,1.60586089917446,1.26161932027148,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0,0.260650843404249,0,0.343143423810856,0,0,0,2.42502057157008,14.9791895559447,2.41912234663744,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,5.93929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0.957003479195758,3.29751336246704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,3.1304703708704,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,1.59238355479446,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.02415155899396,2.37390280405608,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0,0.831192346452549,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,1.06778694409284,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,2.39344304926383,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,1.60586089917446,1.26161932027148,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0,0.260650843404249,0,0.343143423810856,0,0,0,2.42502057157008,14.9791895559447,2.41912234663744,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,5.93929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0.957003479195758,3.29751336246704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,3.1304703708704,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,1.59238355479446,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:55513517..55513530,- | |short_description=p@chr3:55513517..55513530,- | ||
}} | }} |
Latest revision as of 22:43, 29 July 2015
Short description: | p@chr3:55513517..55513530, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:55513517..55513530, - |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.00e-46 | 19 |
placental epithelial cell | 2.19e-34 | 3 |
amniotic epithelial cell | 2.23e-23 | 2 |
amnion mesenchymal stem cell | 1.43e-20 | 5 |
receptor cell | 3.02e-08 | 6 |
sensory epithelial cell | 3.02e-08 | 6 |
olfactory epithelial cell | 3.02e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.56e-63 | 14 |
membranous layer | 2.56e-63 | 14 |
amnion | 1.42e-39 | 7 |
extraembryonic structure | 1.47e-36 | 24 |
somatic layer of lateral plate mesoderm | 1.21e-34 | 8 |
chorion | 4.89e-26 | 7 |
placenta | 5.61e-26 | 4 |
allantois | 5.61e-26 | 4 |
organ component layer | 1.42e-15 | 66 |