FFCP PHASE1:Hg19::chr4:113033421..113033427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:113033421..113033427,- | |||
|description=CAGE_peak_at_chr4:113033421..113033427,- | |description=CAGE_peak_at_chr4:113033421..113033427,- | ||
|id=chr4:113033421..113033427,- | |id=chr4:113033421..113033427,- | ||
|ontology_enrichment_celltype=CL:0000817!8.60e-07!3 | |ontology_enrichment_celltype=CL:0000817!8.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002032;8.10e-41;1!CL:0000557;8.10e-41;1!CL:0000167;2.21e-40;1!CL:0000164;2.21e-40;1!CL:0000502;2.21e-40;1!CL:0000172;2.21e-40;1!CL:0000173;2.21e-40;1 | |ontology_enrichment_celltype_v019=CL:0002032;8.10e-41;1!CL:0000557;8.10e-41;1!CL:0000167;2.21e-40;1!CL:0000164;2.21e-40;1!CL:0000502;2.21e-40;1!CL:0000172;2.21e-40;1!CL:0000173;2.21e-40;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.30e-40,1;CL:0000164,3.30e-40,1;CL:0000502,3.30e-40,1;CL:0000172,3.30e-40,1;CL:0000173,3.30e-40,1;CL:0002351,3.30e-40,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.21e-40;1!UBERON:0009117;8.81e-17;10!UBERON:0005564;8.81e-17;10 | |ontology_enrichment_development_v019=CL:0002351;2.21e-40;1!UBERON:0009117;8.81e-17;10!UBERON:0005564;8.81e-17;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;2.21e-40;1!DOID:5409;2.66e-11;4!DOID:169;6.78e-08;6!DOID:1325;5.22e-07;7!DOID:3904;5.22e-07;7 | |ontology_enrichment_disease_v019=DOID:4430;2.21e-40;1!DOID:5409;2.66e-11;4!DOID:169;6.78e-08;6!DOID:1325;5.22e-07;7!DOID:3904;5.22e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,3.30e-40,1;DOID:5409,2.80e-11,4;DOID:169,7.25e-08,6;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.10e-20;8!UBERON:0003135;2.33e-15;11!UBERON:0000991;1.53e-08;21!UBERON:0003101;3.39e-08;22!UBERON:0000079;3.39e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.10e-20;8!UBERON:0003135;2.33e-15;11!UBERON:0000991;1.53e-08;21!UBERON:0003101;3.39e-08;22!UBERON:0000079;3.39e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.92e-21,8;UBERON:0003135,2.17e-15,11;UBERON:0000991,1.48e-08,21;UBERON:0009196,1.48e-08,21;UBERON:0009117,1.48e-08,21;UBERON:0005564,1.48e-08,21;UBERON:0004176,3.27e-08,22;UBERON:0003101,3.27e-08,22;UBERON:0000079,3.27e-08,22 | |||
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| ||
|short_description=p@chr4:113033421..113033427,- | |short_description=p@chr4:113033421..113033427,- | ||
}} | }} |
Latest revision as of 00:56, 30 July 2015
Short description: | p@chr4:113033421..113033427, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:113033421..113033427, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.30e-40 | 1 |
enteroendocrine cell | 3.30e-40 | 1 |
type D enteroendocrine cell | 3.30e-40 | 1 |
somatostatin secreting cell | 3.30e-40 | 1 |
pancreatic D cell | 3.30e-40 | 1 |
progenitor cell of endocrine pancreas | 3.30e-40 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 9.92e-21 | 8 |
male reproductive organ | 2.17e-15 | 11 |
gonad | 1.48e-08 | 21 |
indifferent external genitalia | 1.48e-08 | 21 |
indifferent gonad | 1.48e-08 | 21 |
gonad primordium | 1.48e-08 | 21 |
external genitalia | 3.27e-08 | 22 |
male organism | 3.27e-08 | 22 |
male reproductive system | 3.27e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.30e-40 | 1 |
lung small cell carcinoma | 2.80e-11 | 4 |
neuroendocrine tumor | 7.25e-08 | 6 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |