FFCP PHASE1:Hg19::chr4:23882555..23882575,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=339bp_to_HQ695733_5end | |association_with_transcript=339bp_to_HQ695733_5end | ||
|cluster_id=chr4:23882555..23882575,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_4_at_HQ695733_5end | |description=CAGE_peak_4_at_HQ695733_5end | ||
|id=chr4:23882555..23882575,- | |id=chr4:23882555..23882575,- | ||
|ontology_enrichment_celltype=CL:0000181!7.87e-19!12;CL:0000417!7.87e-19!12;CL:0000668!7.87e-19!12;CL:0000414!7.87e-19!12;CL:0000412!7.87e-19!12;CL:0000182!7.87e-19!12 | |ontology_enrichment_celltype=CL:0000181!7.87e-19!12;CL:0000417!7.87e-19!12;CL:0000668!7.87e-19!12;CL:0000414!7.87e-19!12;CL:0000412!7.87e-19!12;CL:0000182!7.87e-19!12 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.74e-12;3!CL:0000182;4.94e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.59e-12,3;CL:0000182,5.08e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.97e-34;1!UBERON:0008801;5.97e-34;1 | |||
|ontology_enrichment_disease=DOID:0050619!1.15e-07!1;DOID:1357!1.15e-07!1;DOID:5662!1.91e-07!1 | |ontology_enrichment_disease=DOID:0050619!1.15e-07!1;DOID:1357!1.15e-07!1;DOID:5662!1.91e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3493;9.86e-18;2!DOID:5409;1.12e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.07e-18,2;DOID:5409,1.12e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002365!4.11e-19!31;UBERON:0002330!4.11e-19!31;UBERON:0008835!1.86e-17!22;UBERON:0003894!1.86e-17!22;UBERON:0009854!1.20e-16!23;UBERON:0002107!9.16e-16!19;UBERON:0006925!9.16e-16!19;UBERON:0008836!9.16e-16!19;UBERON:0007499!3.19e-15!25;UBERON:0009497!3.19e-15!25;UBERON:0000015!3.19e-15!25;UBERON:0002423!3.19e-15!25;UBERON:0006235!3.19e-15!25;UBERON:0004161!3.19e-15!25;UBERON:0009856!1.36e-14!26;UBERON:0001829!2.70e-14!2;UBERON:0005057!2.76e-11!26;UBERON:0001044!1.80e-10!6;UBERON:0003293!1.80e-10!6;UBERON:0003294!1.80e-10!6;UBERON:0010047!1.80e-10!6;UBERON:0000167!1.80e-10!6;UBERON:0001041!4.46e-10!98;UBERON:0002530!3.34e-09!59;UBERON:0000466!2.28e-08!126;UBERON:0002368!3.71e-08!35;UBERON:0001736!4.89e-08!1;UBERON:0006298!4.89e-08!1;UBERON:0001831!5.96e-08!1;UBERON:0001567!5.96e-08!1;UBERON:0008801!5.96e-08!1;UBERON:0005418!8.28e-08!1;UBERON:0001389!8.28e-08!1;UBERON:0000026!8.28e-08!1;UBERON:0008784!8.28e-08!1;UBERON:0006058!8.28e-08!1;UBERON:0003663!8.28e-08!1;UBERON:0001383!8.28e-08!1;UBERON:0004256!8.28e-08!1;UBERON:0002529!8.28e-08!1;UBERON:0004708!8.28e-08!1;UBERON:0002101!8.28e-08!1;UBERON:0004709!8.28e-08!1;UBERON:0003661!8.28e-08!1;UBERON:0002471!8.28e-08!1;UBERON:0004357!8.28e-08!1;UBERON:0009872!8.28e-08!1;UBERON:0004347!8.28e-08!1;UBERON:0005420!8.28e-08!1;UBERON:0005732!8.28e-08!1;UBERON:0006057!8.28e-08!1;UBERON:0000978!8.28e-08!1;UBERON:0002103!8.28e-08!1;UBERON:0001665!8.28e-08!1;UBERON:0003823!8.28e-08!1;UBERON:0000154!8.28e-08!1;UBERON:0005733!8.28e-08!1;UBERON:0005730!8.28e-08!1;UBERON:0001764!1.15e-07!1;UBERON:0001825!1.15e-07!1;UBERON:0000997!2.80e-07!1;UBERON:0005056!2.80e-07!1;UBERON:0000077!6.34e-07!130;UBERON:0004921!6.34e-07!129;UBERON:0004185!6.34e-07!129 | |ontology_enrichment_uberon=UBERON:0002365!4.11e-19!31;UBERON:0002330!4.11e-19!31;UBERON:0008835!1.86e-17!22;UBERON:0003894!1.86e-17!22;UBERON:0009854!1.20e-16!23;UBERON:0002107!9.16e-16!19;UBERON:0006925!9.16e-16!19;UBERON:0008836!9.16e-16!19;UBERON:0007499!3.19e-15!25;UBERON:0009497!3.19e-15!25;UBERON:0000015!3.19e-15!25;UBERON:0002423!3.19e-15!25;UBERON:0006235!3.19e-15!25;UBERON:0004161!3.19e-15!25;UBERON:0009856!1.36e-14!26;UBERON:0001829!2.70e-14!2;UBERON:0005057!2.76e-11!26;UBERON:0001044!1.80e-10!6;UBERON:0003293!1.80e-10!6;UBERON:0003294!1.80e-10!6;UBERON:0010047!1.80e-10!6;UBERON:0000167!1.80e-10!6;UBERON:0001041!4.46e-10!98;UBERON:0002530!3.34e-09!59;UBERON:0000466!2.28e-08!126;UBERON:0002368!3.71e-08!35;UBERON:0001736!4.89e-08!1;UBERON:0006298!4.89e-08!1;UBERON:0001831!5.96e-08!1;UBERON:0001567!5.96e-08!1;UBERON:0008801!5.96e-08!1;UBERON:0005418!8.28e-08!1;UBERON:0001389!8.28e-08!1;UBERON:0000026!8.28e-08!1;UBERON:0008784!8.28e-08!1;UBERON:0006058!8.28e-08!1;UBERON:0003663!8.28e-08!1;UBERON:0001383!8.28e-08!1;UBERON:0004256!8.28e-08!1;UBERON:0002529!8.28e-08!1;UBERON:0004708!8.28e-08!1;UBERON:0002101!8.28e-08!1;UBERON:0004709!8.28e-08!1;UBERON:0003661!8.28e-08!1;UBERON:0002471!8.28e-08!1;UBERON:0004357!8.28e-08!1;UBERON:0009872!8.28e-08!1;UBERON:0004347!8.28e-08!1;UBERON:0005420!8.28e-08!1;UBERON:0005732!8.28e-08!1;UBERON:0006057!8.28e-08!1;UBERON:0000978!8.28e-08!1;UBERON:0002103!8.28e-08!1;UBERON:0001665!8.28e-08!1;UBERON:0003823!8.28e-08!1;UBERON:0000154!8.28e-08!1;UBERON:0005733!8.28e-08!1;UBERON:0005730!8.28e-08!1;UBERON:0001764!1.15e-07!1;UBERON:0001825!1.15e-07!1;UBERON:0000997!2.80e-07!1;UBERON:0005056!2.80e-07!1;UBERON:0000077!6.34e-07!130;UBERON:0004921!6.34e-07!129;UBERON:0004185!6.34e-07!129 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.53e-66,2;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0001831,9.85e-34,1;UBERON:0001567,9.85e-34,1;UBERON:0008801,9.85e-34,1;UBERON:0001044,7.58e-23,6;UBERON:0003293,7.58e-23,6;UBERON:0003294,7.58e-23,6;UBERON:0010047,7.58e-23,6;UBERON:0000167,7.58e-23,6;UBERON:0004089,1.27e-17,2;UBERON:0002365,1.49e-17,31;UBERON:0002330,1.49e-17,31;UBERON:0003408,3.71e-14,10;UBERON:0001041,4.44e-14,87;UBERON:0004921,2.09e-10,118;UBERON:0002530,1.66e-09,59;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0002107,5.94e-08,19;UBERON:0006925,5.94e-08,19;UBERON:0008836,5.94e-08,19;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160;UBERON:0008835,5.40e-07,22;UBERON:0003894,5.40e-07,22;UBERON:0000166,5.74e-07,22;UBERON:0009854,9.95e-07,23 | |||
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|short_description=p4@HQ695733 | |short_description=p4@HQ695733 | ||
}} | }} |
Latest revision as of 04:26, 30 July 2015
Short description: | p4@HQ695733 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HQ695733_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | 339bp_to_HQ695733_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.59e-12 | 3 |
hepatocyte | 5.08e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.53e-66 | 2 |
submandibular gland | 3.61e-34 | 1 |
submandibular gland primordium | 3.61e-34 | 1 |
parotid gland | 9.85e-34 | 1 |
cheek | 9.85e-34 | 1 |
parotid gland primordium | 9.85e-34 | 1 |
saliva-secreting gland | 7.58e-23 | 6 |
gland of oral region | 7.58e-23 | 6 |
gland of foregut | 7.58e-23 | 6 |
oral gland | 7.58e-23 | 6 |
oral cavity | 7.58e-23 | 6 |
midface | 1.27e-17 | 2 |
exocrine gland | 1.49e-17 | 31 |
exocrine system | 1.49e-17 | 31 |
gland of gut | 3.71e-14 | 10 |
foregut | 4.44e-14 | 87 |
subdivision of digestive tract | 2.09e-10 | 118 |
gland | 1.66e-09 | 59 |
digestive system | 1.51e-08 | 145 |
digestive tract | 1.51e-08 | 145 |
primitive gut | 1.51e-08 | 145 |
liver | 5.94e-08 | 19 |
digestive gland | 5.94e-08 | 19 |
liver bud | 5.94e-08 | 19 |
endoderm-derived structure | 8.84e-08 | 160 |
endoderm | 8.84e-08 | 160 |
presumptive endoderm | 8.84e-08 | 160 |
hepatic diverticulum | 5.40e-07 | 22 |
liver primordium | 5.40e-07 | 22 |
oral opening | 5.74e-07 | 22 |
digestive tract diverticulum | 9.95e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.07e-18 | 2 |
lung small cell carcinoma | 1.12e-09 | 4 |