FFCP PHASE1:Hg19::chr4:57082268..57082287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:57082268..57082287,+ | |||
|description=CAGE_peak_at_chr4:57082268..57082287,+ | |description=CAGE_peak_at_chr4:57082268..57082287,+ | ||
|id=chr4:57082268..57082287,+ | |id=chr4:57082268..57082287,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.33e-29;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.24e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.33e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.83e-18!57;UBERON:0005068!9.83e-18!57;UBERON:0006241!9.83e-18!57;UBERON:0007135!9.83e-18!57;UBERON:0007023!1.05e-15!115;UBERON:0000955!2.32e-15!69;UBERON:0006238!2.32e-15!69;UBERON:0002616!5.52e-15!59;UBERON:0001017!7.67e-14!82;UBERON:0005743!5.33e-13!86;UBERON:0002780!5.96e-13!41;UBERON:0001890!5.96e-13!41;UBERON:0006240!5.96e-13!41;UBERON:0003080!1.39e-12!42;UBERON:0000073!2.30e-11!94;UBERON:0001016!2.30e-11!94;UBERON:0001893!2.54e-11!34;UBERON:0003075!1.99e-10!86;UBERON:0007284!1.99e-10!86;UBERON:0001869!5.86e-10!32;UBERON:0002346!8.63e-10!90;UBERON:0002791!1.18e-09!33;UBERON:0002619!1.22e-09!22;UBERON:0002020!2.81e-09!34;UBERON:0003528!2.81e-09!34;UBERON:0000956!2.21e-08!25;UBERON:0000203!2.21e-08!25;UBERON:0002298!2.75e-08!8;UBERON:0000991!2.85e-08!21;UBERON:0009196!2.85e-08!21;UBERON:0009117!2.85e-08!21;UBERON:0005564!2.85e-08!21;UBERON:0001950!3.02e-08!20;UBERON:0003056!6.81e-08!61;UBERON:0004176!7.48e-08!22;UBERON:0000033!6.92e-07!123 | |ontology_enrichment_uberon=UBERON:0001049!9.83e-18!57;UBERON:0005068!9.83e-18!57;UBERON:0006241!9.83e-18!57;UBERON:0007135!9.83e-18!57;UBERON:0007023!1.05e-15!115;UBERON:0000955!2.32e-15!69;UBERON:0006238!2.32e-15!69;UBERON:0002616!5.52e-15!59;UBERON:0001017!7.67e-14!82;UBERON:0005743!5.33e-13!86;UBERON:0002780!5.96e-13!41;UBERON:0001890!5.96e-13!41;UBERON:0006240!5.96e-13!41;UBERON:0003080!1.39e-12!42;UBERON:0000073!2.30e-11!94;UBERON:0001016!2.30e-11!94;UBERON:0001893!2.54e-11!34;UBERON:0003075!1.99e-10!86;UBERON:0007284!1.99e-10!86;UBERON:0001869!5.86e-10!32;UBERON:0002346!8.63e-10!90;UBERON:0002791!1.18e-09!33;UBERON:0002619!1.22e-09!22;UBERON:0002020!2.81e-09!34;UBERON:0003528!2.81e-09!34;UBERON:0000956!2.21e-08!25;UBERON:0000203!2.21e-08!25;UBERON:0002298!2.75e-08!8;UBERON:0000991!2.85e-08!21;UBERON:0009196!2.85e-08!21;UBERON:0009117!2.85e-08!21;UBERON:0005564!2.85e-08!21;UBERON:0001950!3.02e-08!20;UBERON:0003056!6.81e-08!61;UBERON:0004176!7.48e-08!22;UBERON:0000033!6.92e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.36e-23;4!UBERON:0000160;7.01e-15;17!UBERON:0005409;8.25e-12;22!UBERON:0002110;8.17e-11;3!UBERON:0002114;1.09e-10;2!UBERON:0004921;5.81e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.44e-23,4;UBERON:0000160,7.17e-15,17;UBERON:0002110,8.17e-11,3;UBERON:0006242,8.17e-11,3;UBERON:0002114,1.20e-10,2;UBERON:0005409,1.60e-10,25 | |||
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| ||
|short_description=p@chr4:57082268..57082287,+ | |short_description=p@chr4:57082268..57082287,+ | ||
}} | }} |
Latest revision as of 05:47, 30 July 2015
Short description: | p@chr4:57082268..57082287, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:57082268..57082287, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.44e-23 | 4 |
intestine | 7.17e-15 | 17 |
gallbladder | 8.17e-11 | 3 |
gall bladder primordium | 8.17e-11 | 3 |
duodenum | 1.20e-10 | 2 |
gastrointestinal system | 1.60e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.33e-15 | 2 |