FFCP PHASE1:Hg19::chr4:8338553..8338559,+: Difference between revisions
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|id=chr4:8338553..8338559,+
|short_description=p@chr4:8338553..8338559,+
|description=CAGE_peak_at_chr4:8338553..8338559,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:8338553..8338559,+ | |||
|description=CAGE_peak_at_chr4:8338553..8338559,+ | |||
|id=chr4:8338553..8338559,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-17!43;CL:0002368!8.88e-16!13;CL:0000223!3.10e-12!59;CL:0002251!6.05e-10!21;CL:0002166!4.42e-09!3;CL:0002621!6.59e-09!3;CL:0000068!7.42e-09!3;CL:0000069!7.42e-09!3;CL:0000307!7.42e-09!3;CL:0000377!7.42e-09!3;CL:0000066!1.48e-08!254;CL:0000076!5.63e-08!62;CL:1001319!7.40e-07!1;CL:1000600!7.40e-07!1;CL:0002327!7.87e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.71e-14;3!CL:0002251;5.82e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.83e-14,3;CL:0000069,1.83e-14,3;CL:0000307,1.83e-14,3;CL:0000377,1.83e-14,3;CL:0002076,2.66e-09,42;CL:0002251,5.70e-09,20;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:1036!7.63e-26!8;DOID:1749!9.71e-21!14;DOID:8692!1.71e-08!31;DOID:0060085!4.08e-07!1;DOID:3165!4.08e-07!1;DOID:0060121!4.08e-07!1;DOID:2438!4.08e-07!1;DOID:4418!4.08e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.03e-26;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.90e-26,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!5.12e-25!4;UBERON:0004785!5.12e-25!4;UBERON:0003729!4.67e-20!5;UBERON:0000344!1.86e-12!12;UBERON:0000974!4.30e-10!10;UBERON:0000166!6.05e-10!21;UBERON:0001004!1.30e-09!72;UBERON:0001949!6.59e-09!3;UBERON:0000161!1.44e-07!35;UBERON:0000997!1.63e-07!1;UBERON:0005056!1.63e-07!1;UBERON:0000165!2.61e-07!28;UBERON:0000930!2.61e-07!28;UBERON:0001708!5.20e-07!4;UBERON:0001704!5.20e-07!4;UBERON:0004645!7.40e-07!1;UBERON:0001256!7.40e-07!1;UBERON:0001259!7.40e-07!1;UBERON:0001911!7.87e-07!4;UBERON:0005333!7.87e-07!4;UBERON:0008425!7.87e-07!4;UBERON:0005311!7.87e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.45e-40;4!UBERON:0004785;2.45e-40;4!UBERON:0000974;2.54e-27;6!UBERON:0003729;3.12e-13;13!UBERON:0000161;2.21e-09;19!UBERON:0000166;2.21e-09;19!UBERON:0000344;5.82e-09;20!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.22e-40,4;UBERON:0004785,2.22e-40,4;UBERON:0000974,6.93e-17,10;UBERON:0003729,3.03e-13,13;UBERON:0000344,5.70e-09,20;UBERON:0000166,3.04e-08,22;UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7 | |||
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|short_description=p@chr4:8338553..8338559,+ | |||
}} | }} |
Latest revision as of 07:28, 30 July 2015
Short description: | p@chr4:8338553..8338559, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:8338553..8338559, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.83e-14 | 3 |
branched duct epithelial cell | 1.83e-14 | 3 |
tracheal epithelial cell | 1.83e-14 | 3 |
tracheoblast | 1.83e-14 | 3 |
endo-epithelial cell | 2.66e-09 | 42 |
epithelial cell of alimentary canal | 5.70e-09 | 20 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.22e-40 | 4 |
respiratory system mucosa | 2.22e-40 | 4 |
neck | 6.93e-17 | 10 |
mouth mucosa | 3.03e-13 | 13 |
mucosa | 5.70e-09 | 20 |
oral opening | 3.04e-08 | 22 |
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.90e-26 | 14 |