FFCP PHASE1:Hg19::chr5:113573789..113573792,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:113573789..113573792,+ | |||
|description=CAGE_peak_at_chr5:113573789..113573792,+ | |||
|id=chr5:113573789..113573792,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-10!180;CL:0002620!7.38e-10!23;CL:0002600!1.60e-09!2;CL:0000192!1.04e-07!42;CL:0000514!1.04e-07!42;CL:0000222!1.34e-07!119;CL:0000183!2.67e-07!59;CL:0002573!8.13e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002573;2.35e-23;2!CL:0002574;1.03e-17;1!CL:0002600;7.98e-10;2!CL:0002598;1.57e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.35e-23,2;CL:0002574,7.37e-18,1;CL:0002600,7.98e-10,2;CL:0002598,2.02e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.91e-08!5;DOID:450!6.91e-08!5;DOID:66!6.91e-08!5;DOID:423!6.91e-08!5;DOID:0080000!6.91e-08!5;DOID:11722!6.91e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:4231;1.03e-09;2!DOID:1907;1.03e-09;2!DOID:4556;6.88e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,9.46e-10,2;DOID:1907,9.46e-10,2;DOID:4556,7.28e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!9.55e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.03e-17;1!UBERON:0000010;1.97e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.22e-17,1;UBERON:0000010,1.97e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.42306505074684,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,1.10550885580591,0,0,0,0,0.718618141816238,0.336672227908132,0,0,0,0,0,0,0.358779271377724,0,0,1.20036438433761,0.515262646192195,0,0,0,0,0,0,0,0,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,1.56390506042549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.850468526382578,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,1.02359116524534,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,8.10285747973363,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66963057534359,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00640639386872,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0.450772826991655,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24830801388074,3.06768257132968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:113573789..113573792,+ | |||
}} |
Latest revision as of 08:48, 30 July 2015
Short description: | p@chr5:113573789..113573792, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:113573789..113573792, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.35e-23 | 2 |
stromal cell of pancreas | 7.37e-18 | 1 |
smooth muscle cell of trachea | 7.98e-10 | 2 |
bronchial smooth muscle cell | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.22e-17 | 1 |
peripheral nervous system | 1.97e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 9.46e-10 | 2 |
malignant fibroxanthoma | 9.46e-10 | 2 |
lung large cell carcinoma | 7.28e-07 | 3 |