FFCP PHASE1:Hg19::chr5:123739189..123739215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:123739189..123739215,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr5:123739189..123739215,+ | |description=CAGE_peak_at_chr5:123739189..123739215,+ | ||
|id=chr5:123739189..123739215,+ | |id=chr5:123739189..123739215,+ | ||
|ontology_enrichment_celltype=CL:0002178!9.56e-11!3;CL:0000167!8.78e-09!1;CL:0000164!8.78e-09!1;CL:0000502!8.78e-09!1;CL:0000172!8.78e-09!1;CL:0000173!8.78e-09!1;CL:0002351!8.78e-09!1 | |ontology_enrichment_celltype=CL:0002178!9.56e-11!3;CL:0000167!8.78e-09!1;CL:0000164!8.78e-09!1;CL:0000502!8.78e-09!1;CL:0000172!8.78e-09!1;CL:0000173!8.78e-09!1;CL:0002351!8.78e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.85e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.85e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!6.03e-09!1;DOID:1357!6.03e-09!1;DOID:4430!8.78e-09!1;DOID:5409!4.23e-08!4 | |ontology_enrichment_disease=DOID:0050619!6.03e-09!1;DOID:1357!6.03e-09!1;DOID:4430!8.78e-09!1;DOID:5409!4.23e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.58e-34;1!DOID:1357;2.58e-34;1!DOID:3493;5.48e-18;2!DOID:3119;1.64e-10;14!DOID:5409;1.70e-09;4!DOID:0050615;3.01e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.58e-34,1;DOID:1357,2.58e-34,1;DOID:3493,5.48e-18,2;DOID:3119,1.64e-10,14;DOID:5409,1.70e-09,4;DOID:0050615,3.01e-09,16 | |||
|ontology_enrichment_uberon=UBERON:0003127!9.32e-16!2;UBERON:0000341!1.08e-15!2;UBERON:0000974!1.47e-11!10;UBERON:0005795!4.37e-11!22;UBERON:0000002!5.00e-11!6;UBERON:0001560!5.00e-11!6;UBERON:0001004!4.08e-10!72;UBERON:0000065!1.46e-09!53;UBERON:0001764!6.03e-09!1;UBERON:0001825!6.03e-09!1;UBERON:0002146!9.46e-09!1;UBERON:0005623!9.46e-09!1;UBERON:0002171!1.18e-08!1;UBERON:0006518!1.18e-08!1;UBERON:0008949!1.18e-08!1;UBERON:0000101!1.18e-08!1;UBERON:0002167!1.18e-08!1;UBERON:0002372!1.71e-08!1;UBERON:0001961!1.71e-08!1;UBERON:0001744!1.71e-08!1;UBERON:0001735!1.71e-08!1;UBERON:0001041!2.26e-08!98;UBERON:0006834!2.84e-08!1;UBERON:0000995!3.24e-08!21;UBERON:0003975!7.81e-08!22;UBERON:0005178!3.78e-07!34;UBERON:0002224!3.78e-07!34;UBERON:0005181!6.27e-07!35;UBERON:0001042!6.34e-07!10;UBERON:0009145!6.34e-07!10;UBERON:0000077!6.86e-07!130;UBERON:0004921!6.86e-07!129;UBERON:0004185!6.86e-07!129;UBERON:0004175!7.21e-07!25;UBERON:0000072!7.59e-07!46 | |ontology_enrichment_uberon=UBERON:0003127!9.32e-16!2;UBERON:0000341!1.08e-15!2;UBERON:0000974!1.47e-11!10;UBERON:0005795!4.37e-11!22;UBERON:0000002!5.00e-11!6;UBERON:0001560!5.00e-11!6;UBERON:0001004!4.08e-10!72;UBERON:0000065!1.46e-09!53;UBERON:0001764!6.03e-09!1;UBERON:0001825!6.03e-09!1;UBERON:0002146!9.46e-09!1;UBERON:0005623!9.46e-09!1;UBERON:0002171!1.18e-08!1;UBERON:0006518!1.18e-08!1;UBERON:0008949!1.18e-08!1;UBERON:0000101!1.18e-08!1;UBERON:0002167!1.18e-08!1;UBERON:0002372!1.71e-08!1;UBERON:0001961!1.71e-08!1;UBERON:0001744!1.71e-08!1;UBERON:0001735!1.71e-08!1;UBERON:0001041!2.26e-08!98;UBERON:0006834!2.84e-08!1;UBERON:0000995!3.24e-08!21;UBERON:0003975!7.81e-08!22;UBERON:0005178!3.78e-07!34;UBERON:0002224!3.78e-07!34;UBERON:0005181!6.27e-07!35;UBERON:0001042!6.34e-07!10;UBERON:0009145!6.34e-07!10;UBERON:0000077!6.86e-07!130;UBERON:0004921!6.86e-07!129;UBERON:0004185!6.86e-07!129;UBERON:0004175!7.21e-07!25;UBERON:0000072!7.59e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.58e-34;1!UBERON:0001825;2.58e-34;1!UBERON:0003127;9.07e-18;2!UBERON:0000341;1.07e-17;2!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5!UBERON:0000974;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.58e-34,1;UBERON:0001825,2.58e-34,1;UBERON:0003127,9.07e-18,2;UBERON:0000341,1.07e-17,2 | |||
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|short_description=p@chr5:123739189..123739215,+ | |short_description=p@chr5:123739189..123739215,+ | ||
}} | }} |
Latest revision as of 09:12, 30 July 2015
Short description: | p@chr5:123739189..123739215, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:123739189..123739215, + |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.58e-34 | 1 |
paranasal sinus | 2.58e-34 | 1 |
open tracheal system trachea | 9.07e-18 | 2 |
throat | 1.07e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.58e-34 | 1 |
maxillary sinus cancer | 2.58e-34 | 1 |
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
gastrointestinal system cancer | 1.64e-10 | 14 |
lung small cell carcinoma | 1.70e-09 | 4 |
respiratory system cancer | 3.01e-09 | 16 |