FFCP PHASE1:Hg19::chr5:123739217..123739231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:123739217..123739231,+ | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_at_chr5:123739217..123739231,+ | |description=CAGE_peak_at_chr5:123739217..123739231,+ | ||
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|ontology_enrichment_celltype=CL:0000167!5.26e-18!1;CL:0000164!5.26e-18!1;CL:0000502!5.26e-18!1;CL:0000172!5.26e-18!1;CL:0000173!5.26e-18!1;CL:0002351!5.26e-18!1;CL:0002178!5.80e-07!3 | |ontology_enrichment_celltype=CL:0000167!5.26e-18!1;CL:0000164!5.26e-18!1;CL:0000502!5.26e-18!1;CL:0000172!5.26e-18!1;CL:0000173!5.26e-18!1;CL:0002351!5.26e-18!1;CL:0002178!5.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3 | |ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.76e-18,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!4.44e-18!1;DOID:1357!4.44e-18!1;DOID:4430!5.26e-18!1;DOID:3493!7.98e-10!2;DOID:4074!1.57e-09!2;DOID:4905!1.57e-09!2;DOID:3498!1.57e-09!2 | |ontology_enrichment_disease=DOID:0050619!4.44e-18!1;DOID:1357!4.44e-18!1;DOID:4430!5.26e-18!1;DOID:3493!7.98e-10!2;DOID:4074!1.57e-09!2;DOID:4905!1.57e-09!2;DOID:3498!1.57e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:0050619;5.12e-50;1!DOID:1357;5.12e-50;1!DOID:3493;4.32e-26;2!DOID:3119;2.95e-15;14 | |ontology_enrichment_disease_v019=DOID:0050619;5.12e-50;1!DOID:1357;5.12e-50;1!DOID:3493;4.32e-26;2!DOID:3119;2.95e-15;14 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.58e-50,1;DOID:1357,6.58e-50,1;DOID:3493,4.32e-26,2;DOID:3119,2.95e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0000341!3.62e-34!2;UBERON:0001764!4.44e-18!1;UBERON:0001825!4.44e-18!1;UBERON:0000974!1.43e-15!10;UBERON:0003127!1.22e-09!2 | |ontology_enrichment_uberon=UBERON:0000341!3.62e-34!2;UBERON:0001764!4.44e-18!1;UBERON:0001825!4.44e-18!1;UBERON:0000974!1.43e-15!10;UBERON:0003127!1.22e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.12e-50;1!UBERON:0001825;5.12e-50;1!UBERON:0000341;8.10e-26;2!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0000974;1.50e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0001764;5.12e-50;1!UBERON:0001825;5.12e-50;1!UBERON:0000341;8.10e-26;2!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0000974;1.50e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.58e-50,1;UBERON:0001825,6.58e-50,1;UBERON:0000341,7.14e-26,2;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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|short_description=p@chr5:123739217..123739231,+ | |short_description=p@chr5:123739217..123739231,+ | ||
}} | }} |
Latest revision as of 09:12, 30 July 2015
Short description: | p@chr5:123739217..123739231, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:123739217..123739231, + |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.58e-50 | 1 |
paranasal sinus | 6.58e-50 | 1 |
throat | 7.14e-26 | 2 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.58e-50 | 1 |
maxillary sinus cancer | 6.58e-50 | 1 |
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
gastrointestinal system cancer | 2.95e-15 | 14 |