FFCP PHASE1:Hg19::chr5:133842257..133842269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000515627_5end | |association_with_transcript=14bp_to_ENST00000515627_5end | ||
|cluster_id=chr5:133842257..133842269,+ | |||
|description=CAGE_peak_1_at_ENST00000515627_5end | |description=CAGE_peak_1_at_ENST00000515627_5end | ||
|id=chr5:133842257..133842269,+ | |id=chr5:133842257..133842269,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.30e-11!254;CL:0000223!2.09e-10!59 | |ontology_enrichment_celltype=CL:0000066!1.30e-11!254;CL:0000223!2.09e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.66e-15;1 | |||
|ontology_enrichment_disease=DOID:305!2.36e-31!106;DOID:0050687!3.27e-23!143;DOID:162!7.64e-15!235;DOID:14566!3.67e-14!239;DOID:299!5.05e-09!25;DOID:170!3.30e-07!6;DOID:7!4.14e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.07e-08;2!DOID:4929;2.07e-08;2!DOID:3493;2.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.73e-08,2;DOID:3493,2.00e-08,2;DOID:3910,2.87e-08,2;DOID:305,8.12e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.94e-14!155;UBERON:0001555!6.94e-14!155;UBERON:0007026!6.94e-14!155;UBERON:0004119!2.94e-12!169;UBERON:0000925!2.94e-12!169;UBERON:0006595!2.94e-12!169;UBERON:0004921!2.94e-12!129;UBERON:0004185!2.94e-12!129;UBERON:0000077!3.57e-10!130;UBERON:0005409!1.88e-09!35;UBERON:0009856!5.19e-09!26;UBERON:0009854!7.54e-09!23;UBERON:0000160!1.42e-08!27;UBERON:0000481!1.67e-08!347;UBERON:0007499!7.15e-08!25;UBERON:0009497!8.78e-08!25;UBERON:0000015!8.78e-08!25;UBERON:0002423!8.78e-08!25;UBERON:0006235!8.78e-08!25;UBERON:0004161!8.78e-08!25;UBERON:0008835!1.14e-07!22;UBERON:0003894!1.14e-07!22;UBERON:0001041!3.33e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.99e-20;17!UBERON:0005409;1.42e-15;22!UBERON:0001154;1.66e-15;1!UBERON:0001153;1.66e-15;1!UBERON:0000997;1.66e-15;1!UBERON:0004913;1.66e-15;1!UBERON:0005056;1.66e-15;1!UBERON:0009854;1.66e-15;1!UBERON:0003703;1.66e-15;1!UBERON:0004176;1.66e-15;1!UBERON:0001174;1.66e-15;1!UBERON:0004914;1.66e-15;1!UBERON:0009856;3.94e-15;4!UBERON:0002108;1.78e-12;4!UBERON:0004907;1.78e-12;5!UBERON:0000059;2.53e-12;11!UBERON:0004921;9.72e-11;33!UBERON:0004903;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0002173;2.07e-08;2!UBERON:0002186;2.07e-08;2!UBERON:0001155;3.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.45e-20,17;UBERON:0001154,9.99e-16,1;UBERON:0001153,9.99e-16,1;UBERON:0001045,9.99e-16,1;UBERON:0004913,1.16e-15,1;UBERON:0003703,1.16e-15,1;UBERON:0001174,1.16e-15,1;UBERON:0004914,1.16e-15,1;UBERON:0000997,1.34e-15,1;UBERON:0005056,1.34e-15,1;UBERON:0005409,6.47e-14,25;UBERON:0004907,1.42e-12,5;UBERON:0002108,1.59e-12,4;UBERON:0000059,1.75e-12,11;UBERON:0009856,5.41e-09,26;UBERON:0004903,2.87e-08,2;UBERON:0002173,2.87e-08,2;UBERON:0002186,2.87e-08,2;UBERON:0006955,3.08e-08,2;UBERON:0004801,3.08e-08,2;UBERON:0001155,2.36e-07,9;UBERON:0004921,5.90e-07,118 | |||
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| ||
|short_description=p1@ENST00000515627 | |short_description=p1@ENST00000515627 | ||
}} | }} |
Latest revision as of 09:49, 30 July 2015
Short description: | p1@ENST00000515627 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000515627_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000515627_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.45e-20 | 17 |
vermiform appendix | 9.99e-16 | 1 |
caecum | 9.99e-16 | 1 |
midgut | 9.99e-16 | 1 |
hepatopancreatic ampulla | 1.16e-15 | 1 |
extrahepatic bile duct | 1.16e-15 | 1 |
common bile duct | 1.16e-15 | 1 |
duodenal papilla | 1.16e-15 | 1 |
mammalian vulva | 1.34e-15 | 1 |
external female genitalia | 1.34e-15 | 1 |
gastrointestinal system | 6.47e-14 | 25 |
lower digestive tract | 1.42e-12 | 5 |
small intestine | 1.59e-12 | 4 |
large intestine | 1.75e-12 | 11 |
sac | 5.41e-09 | 26 |
bronchoalveolar duct junction | 2.87e-08 | 2 |
alveolar duct | 2.87e-08 | 2 |
bronchiole | 2.87e-08 | 2 |
uterine epithelium | 3.08e-08 | 2 |
cervix epithelium | 3.08e-08 | 2 |
colon | 2.36e-07 | 9 |
subdivision of digestive tract | 5.90e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.73e-08 | 2 |
signet ring cell adenocarcinoma | 2.00e-08 | 2 |
lung adenocarcinoma | 2.87e-08 | 2 |
carcinoma | 8.12e-08 | 106 |