FFCP PHASE1:Hg19::chr5:134906681..134906686,-: Difference between revisions
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|id=chr5:134906681..134906686,-
|short_description=p@chr5:134906681..134906686,-
|description=CAGE_peak_at_chr5:134906681..134906686,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:134906681..134906686,- | |||
|coexpression_cluster_id=C607 | |||
|description=CAGE_peak_at_chr5:134906681..134906686,- | |||
|id=chr5:134906681..134906686,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.21e-13;2!CL:1000448;1.21e-13;2!CL:0002308;1.21e-13;2!CL:0002140;1.21e-13;2!CL:0000362;6.16e-12;9!CL:0002159;5.18e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0000362,5.83e-12,9;CL:0002159,5.00e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.31e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-13!115;UBERON:0002619!7.95e-09!22;UBERON:0000956!1.17e-07!25;UBERON:0000203!1.17e-07!25;UBERON:0001950!1.92e-07!20;UBERON:0001871!2.17e-07!7;UBERON:0001869!2.94e-07!32;UBERON:0000349!2.99e-07!5;UBERON:0000153!4.58e-07!129;UBERON:0007811!4.58e-07!129;UBERON:0002791!5.34e-07!33;UBERON:0003056!5.96e-07!61;UBERON:0002021!6.02e-07!5;UBERON:0002020!9.37e-07!34;UBERON:0003528!9.37e-07!34;UBERON:0001893!9.37e-07!34;UBERON:0002780!9.49e-07!41;UBERON:0001890!9.49e-07!41;UBERON:0006240!9.49e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;3.15e-26;1!UBERON:0001003;1.55e-15;15!UBERON:0007376;1.55e-15;15!UBERON:0000007;1.21e-13;2!UBERON:0002419;1.21e-13;2!UBERON:0007771;1.21e-13;2!UBERON:0003297;1.21e-13;2!UBERON:0001821;1.21e-13;2!UBERON:0003487;1.21e-13;2!UBERON:0001820;1.21e-13;2!UBERON:0010371;1.02e-07;31!UBERON:0000014;1.44e-07;4!UBERON:0003296;1.80e-07;4!UBERON:0010133;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.78e-26,1;UBERON:0001003,1.44e-15,15;UBERON:0007376,1.44e-15,15;UBERON:0007383,1.44e-15,15;UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0000007,1.37e-13,2;UBERON:0000014,1.40e-07,4;UBERON:0003296,1.92e-07,4;UBERON:0010133,1.92e-07,4 | |||
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| ||
|short_description=p@chr5:134906681..134906686,- | |||
}} | }} |
Latest revision as of 09:58, 30 July 2015
Short description: | p@chr5:134906681..134906686, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:134906681..134906686, - |
Coexpression cluster: | C607_small_cervical_Keratinocyte_Sebocyte_maxillary_normal_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.21e-13 | 2 |
epithelial cell of sweat gland | 1.21e-13 | 2 |
epithelial cell of skin gland | 1.21e-13 | 2 |
acinar cell of sebaceous gland | 1.21e-13 | 2 |
epidermal cell | 5.83e-12 | 9 |
general ecto-epithelial cell | 5.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
surface | 2.78e-26 | 1 |
skin epidermis | 1.44e-15 | 15 |
outer epithelium | 1.44e-15 | 15 |
enveloping layer of ectoderm | 1.44e-15 | 15 |
skin gland | 1.21e-13 | 2 |
epidermis gland | 1.21e-13 | 2 |
gland of integumental system | 1.21e-13 | 2 |
sebaceous gland | 1.21e-13 | 2 |
skin sebaceous gland | 1.21e-13 | 2 |
sweat gland | 1.21e-13 | 2 |
sweat gland placode | 1.21e-13 | 2 |
sebaceous gland placode | 1.21e-13 | 2 |
pituitary gland | 1.37e-13 | 2 |
zone of skin | 1.40e-07 | 4 |
gland of diencephalon | 1.92e-07 | 4 |
neuroendocrine gland | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.31e-07 | 4 |