FFCP PHASE1:Hg19::chr5:153855212..153855222,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:153855212..153855222,- | |||
|coexpression_cluster_id=C360 | |coexpression_cluster_id=C360 | ||
|description=CAGE_peak_at_chr5:153855212..153855222,- | |description=CAGE_peak_at_chr5:153855212..153855222,- | ||
|id=chr5:153855212..153855222,- | |id=chr5:153855212..153855222,- | ||
|ontology_enrichment_celltype=CL:0000349!2.20e-16!3;CL:0002577!2.20e-16!3;CL:0002322!2.90e-15!5;CL:0002536!2.34e-11!2;CL:0002537!9.14e-10!5 | |ontology_enrichment_celltype=CL:0000349!2.20e-16!3;CL:0002577!2.20e-16!3;CL:0002322!2.90e-15!5;CL:0002536!2.34e-11!2;CL:0002537!9.14e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.54e-55;19!CL:0002577;8.82e-51;3!CL:0002536;5.07e-34;2!CL:0002537;4.95e-30;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.55e-55,19;CL:0002577,8.11e-51,3;CL:0002536,5.07e-34,2;CL:0002537,5.20e-30,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.09e-10!2;DOID:169!9.24e-08!6;DOID:3095!2.39e-07!22;DOID:2994!2.39e-07!22 | |ontology_enrichment_disease=DOID:114!1.09e-10!2;DOID:169!9.24e-08!6;DOID:3095!2.39e-07!22;DOID:2994!2.39e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.94e-28!14;UBERON:0000158!3.94e-28!14;UBERON:0000478!3.12e-23!24;UBERON:0000305!3.45e-18!7;UBERON:0004871!6.98e-16!8;UBERON:0001987!2.09e-12!4;UBERON:0004340!2.09e-12!4;UBERON:0003124!5.86e-12!7;UBERON:0000013!3.16e-09!5;UBERON:0002410!3.16e-09!5;UBERON:0004923!1.46e-08!57;UBERON:0002110!3.32e-07!3;UBERON:0006242!3.32e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!3.94e-28!14;UBERON:0000158!3.94e-28!14;UBERON:0000478!3.12e-23!24;UBERON:0000305!3.45e-18!7;UBERON:0004871!6.98e-16!8;UBERON:0001987!2.09e-12!4;UBERON:0004340!2.09e-12!4;UBERON:0003124!5.86e-12!7;UBERON:0000013!3.16e-09!5;UBERON:0002410!3.16e-09!5;UBERON:0004923!1.46e-08!57;UBERON:0002110!3.32e-07!3;UBERON:0006242!3.32e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.96e-58;7!UBERON:0000478;1.79e-43;24!UBERON:0005631;5.22e-41;10!UBERON:0000158;5.22e-41;10!UBERON:0001987;2.61e-38;4!UBERON:0002114;9.91e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.08e-74,14;UBERON:0000158,1.08e-74,14;UBERON:0000305,2.08e-58,7;UBERON:0004871,3.73e-51,8;UBERON:0000478,1.79e-43,24;UBERON:0001987,2.45e-38,4;UBERON:0004340,2.45e-38,4;UBERON:0003124,2.99e-22,7;UBERON:0004923,1.54e-15,66;UBERON:0000995,7.89e-08,21;UBERON:0005795,1.70e-07,22;UBERON:0003975,1.70e-07,22 | |||
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|short_description=p@chr5:153855212..153855222,- | |short_description=p@chr5:153855212..153855222,- | ||
}} | }} |
Latest revision as of 12:09, 30 July 2015
Short description: | p@chr5:153855212..153855222, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:153855212..153855222, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.55e-55 | 19 |
placental epithelial cell | 8.11e-51 | 3 |
amniotic epithelial cell | 5.07e-34 | 2 |
amnion mesenchymal stem cell | 5.20e-30 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.08e-74 | 14 |
membranous layer | 1.08e-74 | 14 |
amnion | 2.08e-58 | 7 |
somatic layer of lateral plate mesoderm | 3.73e-51 | 8 |
extraembryonic structure | 1.79e-43 | 24 |
placenta | 2.45e-38 | 4 |
allantois | 2.45e-38 | 4 |
chorion | 2.99e-22 | 7 |
organ component layer | 1.54e-15 | 66 |
uterus | 7.89e-08 | 21 |
embryonic uterus | 1.70e-07 | 22 |
internal female genitalia | 1.70e-07 | 22 |