FFCP PHASE1:Hg19::chr5:175971879..175971904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:175971879..175971904,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr5:175971879..175971904,+ | |description=CAGE_peak_at_chr5:175971879..175971904,+ | ||
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|ontology_enrichment_celltype=CL:0002178!8.58e-10!3;CL:0000083!1.49e-07!4 | |ontology_enrichment_celltype=CL:0002178!8.58e-10!3;CL:0000083!1.49e-07!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4929!2.06e-14!2;DOID:3493!2.21e-14!2;DOID:3119!8.94e-08!14;DOID:1793!1.49e-07!4 | |ontology_enrichment_disease=DOID:4929!2.06e-14!2;DOID:3493!2.21e-14!2;DOID:3119!8.94e-08!14;DOID:1793!1.49e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.17e-17;2 | |ontology_enrichment_disease_v019=DOID:3493;1.17e-17;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.27e-17,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.62e-21!35;UBERON:0000160!1.95e-18!27;UBERON:0002108!2.69e-11!14;UBERON:0004921!4.63e-10!129;UBERON:0004185!4.63e-10!129;UBERON:0002294!2.74e-09!7;UBERON:0001173!2.74e-09!7;UBERON:0004912!2.74e-09!7;UBERON:0001007!4.31e-09!155;UBERON:0001555!4.31e-09!155;UBERON:0007026!4.31e-09!155;UBERON:0004913!3.11e-08!1;UBERON:0003703!3.11e-08!1;UBERON:0001174!3.11e-08!1;UBERON:0004914!3.11e-08!1;UBERON:0001154!3.83e-08!1;UBERON:0001153!3.83e-08!1;UBERON:0004119!4.54e-08!169;UBERON:0000925!4.54e-08!169;UBERON:0006595!4.54e-08!169;UBERON:0001301!8.12e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0002394!1.26e-07!4;UBERON:0003928!1.26e-07!4;UBERON:0001155!1.71e-07!9;UBERON:0009854!5.37e-07!23 | |ontology_enrichment_uberon=UBERON:0005409!6.62e-21!35;UBERON:0000160!1.95e-18!27;UBERON:0002108!2.69e-11!14;UBERON:0004921!4.63e-10!129;UBERON:0004185!4.63e-10!129;UBERON:0002294!2.74e-09!7;UBERON:0001173!2.74e-09!7;UBERON:0004912!2.74e-09!7;UBERON:0001007!4.31e-09!155;UBERON:0001555!4.31e-09!155;UBERON:0007026!4.31e-09!155;UBERON:0004913!3.11e-08!1;UBERON:0003703!3.11e-08!1;UBERON:0001174!3.11e-08!1;UBERON:0004914!3.11e-08!1;UBERON:0001154!3.83e-08!1;UBERON:0001153!3.83e-08!1;UBERON:0004119!4.54e-08!169;UBERON:0000925!4.54e-08!169;UBERON:0006595!4.54e-08!169;UBERON:0001301!8.12e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0002394!1.26e-07!4;UBERON:0003928!1.26e-07!4;UBERON:0001155!1.71e-07!9;UBERON:0009854!5.37e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.91e-30;17!UBERON:0002108;1.59e-27;4!UBERON:0005409;1.64e-23;22!UBERON:0004921;6.16e-16;33!UBERON:0001155;1.31e-15;9!UBERON:0000059;5.76e-13;11 | |ontology_enrichment_uberon_v019=UBERON:0000160;7.91e-30;17!UBERON:0002108;1.59e-27;4!UBERON:0005409;1.64e-23;22!UBERON:0004921;6.16e-16;33!UBERON:0001155;1.31e-15;9!UBERON:0000059;5.76e-13;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.91e-30,17;UBERON:0002108,1.59e-27,4;UBERON:0005409,6.97e-21,25;UBERON:0001155,1.31e-15,9;UBERON:0000059,5.76e-13,11 | |||
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|short_description=p@chr5:175971879..175971904,+ | |short_description=p@chr5:175971879..175971904,+ | ||
}} | }} |
Latest revision as of 13:29, 30 July 2015
Short description: | p@chr5:175971879..175971904, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:175971879..175971904, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.91e-30 | 17 |
small intestine | 1.59e-27 | 4 |
gastrointestinal system | 6.97e-21 | 25 |
colon | 1.31e-15 | 9 |
large intestine | 5.76e-13 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.27e-17 | 2 |