FFCP PHASE1:Hg19::chr5:414689..414704,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:414689..414704,+ | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr5:414689..414704,+ | |description=CAGE_peak_at_chr5:414689..414704,+ | ||
|id=chr5:414689..414704,+ | |id=chr5:414689..414704,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.16e-09!3;CL:0000861!3.16e-09!3;CL:0000764!3.96e-07!2;CL:0000765!3.96e-07!2;CL:0000050!3.96e-07!2;CL:0000038!3.96e-07!2;CL:0000558!3.96e-07!2;CL:0000547!3.96e-07!2;CL:0000549!3.96e-07!2;CL:0000550!3.96e-07!2;CL:0000552!3.96e-07!2;CL:0002032!6.38e-07!165;CL:0000837!6.38e-07!165 | |ontology_enrichment_celltype=CL:0002150!3.16e-09!3;CL:0000861!3.16e-09!3;CL:0000764!3.96e-07!2;CL:0000765!3.96e-07!2;CL:0000050!3.96e-07!2;CL:0000038!3.96e-07!2;CL:0000558!3.96e-07!2;CL:0000547!3.96e-07!2;CL:0000549!3.96e-07!2;CL:0000550!3.96e-07!2;CL:0000552!3.96e-07!2;CL:0002032!6.38e-07!165;CL:0000837!6.38e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.72e-10;2!CL:0000558;2.72e-10;2!CL:0002178;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.49e-10,2;CL:0000765,2.49e-10,2;CL:0000050,2.49e-10,2;CL:0000038,2.49e-10,2;CL:0000558,2.49e-10,2;CL:0000547,2.49e-10,2;CL:0000549,2.49e-10,2;CL:0000550,2.49e-10,2;CL:0000552,2.49e-10,2;CL:0002178,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.30e-09!51;DOID:0060083!1.30e-09!51;DOID:1240!8.06e-09!39;DOID:14566!1.26e-08!239;DOID:162!2.69e-08!235;DOID:0050686!9.51e-07!137 | |ontology_enrichment_disease=DOID:2531!1.30e-09!51;DOID:0060083!1.30e-09!51;DOID:1240!8.06e-09!39;DOID:14566!1.26e-08!239;DOID:162!2.69e-08!235;DOID:0050686!9.51e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1799;3.25e-19;1!DOID:10165;3.25e-19;1!DOID:1798;3.25e-19;1!DOID:3493;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.62e-19,1;DOID:10165,5.62e-19,1;DOID:1798,5.62e-19,1;DOID:3493,2.99e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0.626719583092093,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0.781552381608161,1.9488432172667,0,0,0,0,1.30998378285754,0,0,0.334330152832435,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,33.1205707872059,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0.677294319023596,0.365446585430928,0.410577285266046,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30929650270355,0,0,0,0,0,0,0,0,6.98975697164723,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24411862352257,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.682008283964155,2.14371304124943,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,0.784306353074702,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0.626719583092093,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0.781552381608161,1.9488432172667,0,0,0,0,1.30998378285754,0,0,0.334330152832435,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,33.1205707872059,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0.677294319023596,0.365446585430928,0.410577285266046,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30929650270355,0,0,0,0,0,0,0,0,6.98975697164723,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24411862352257,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0.121917924982269,0,0,0,0,0,0.795803100645473,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.682008283964155,2.14371304124943,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr5:414689..414704,+ | |short_description=p@chr5:414689..414704,+ | ||
}} | }} |
Latest revision as of 14:51, 30 July 2015
Short description: | p@chr5:414689..414704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:414689..414704, + |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.49e-10 | 2 |
erythroblast | 2.49e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 2.49e-10 | 2 |
erythroid progenitor cell | 2.49e-10 | 2 |
reticulocyte | 2.49e-10 | 2 |
proerythroblast | 2.49e-10 | 2 |
basophilic erythroblast | 2.49e-10 | 2 |
polychromatophilic erythroblast | 2.49e-10 | 2 |
orthochromatic erythroblast | 2.49e-10 | 2 |
epithelial cell of stomach | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.62e-19 | 1 |
endocrine pancreas cancer | 5.62e-19 | 1 |
pancreatic endocrine carcinoma | 5.62e-19 | 1 |
signet ring cell adenocarcinoma | 2.99e-10 | 2 |