FFCP PHASE1:Hg19::chr5:54673578..54673591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:54673578..54673591,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr5:54673578..54673591,+ | |description=CAGE_peak_at_chr5:54673578..54673591,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002589!3.27e-10!2 | |ontology_enrichment_celltype=CL:0002589!3.27e-10!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;6.58e-50;1 | |ontology_enrichment_development_v019=UBERON:0006242;6.58e-50;1 | ||
|ontology_enrichment_disease=DOID:3493!1.72e-10!2 | |ontology_enrichment_disease=DOID:3493!1.72e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;7.14e-26;2 | |ontology_enrichment_disease_v019=DOID:3493;7.14e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,7.14e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0001301!3.91e-19!1;UBERON:0002294!2.42e-11!7;UBERON:0001173!2.42e-11!7;UBERON:0004912!2.42e-11!7;UBERON:0001529!3.27e-10!2;UBERON:0007204!3.27e-10!2;UBERON:0002110!2.19e-07!3;UBERON:0006242!2.19e-07!3;UBERON:0006947!2.97e-07!3;UBERON:0004054!2.97e-07!3 | |ontology_enrichment_uberon=UBERON:0001301!3.91e-19!1;UBERON:0002294!2.42e-11!7;UBERON:0001173!2.42e-11!7;UBERON:0004912!2.42e-11!7;UBERON:0001529!3.27e-10!2;UBERON:0007204!3.27e-10!2;UBERON:0002110!2.19e-07!3;UBERON:0006242!2.19e-07!3;UBERON:0006947!2.97e-07!3;UBERON:0004054!2.97e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.12e-17;3!UBERON:0000160;4.07e-12;17!UBERON:0002108;2.94e-11;4!UBERON:0005409;1.02e-09;22!UBERON:0002294;2.35e-08;7!UBERON:0001173;2.35e-08;7!UBERON:0001155;7.48e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002110;1.12e-17;3!UBERON:0000160;4.07e-12;17!UBERON:0002108;2.94e-11;4!UBERON:0005409;1.02e-09;22!UBERON:0002294;2.35e-08;7!UBERON:0001173;2.35e-08;7!UBERON:0001155;7.48e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.12e-17,3;UBERON:0006242,1.12e-17,3;UBERON:0000160,4.07e-12,17;UBERON:0002108,2.94e-11,4;UBERON:0005409,1.03e-08,25;UBERON:0001155,7.48e-07,9;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
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|short_description=p@chr5:54673578..54673591,+ | |short_description=p@chr5:54673578..54673591,+ | ||
}} | }} |
Latest revision as of 15:17, 30 July 2015
Short description: | p@chr5:54673578..54673591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:54673578..54673591, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.12e-17 | 3 |
gall bladder primordium | 1.12e-17 | 3 |
intestine | 4.07e-12 | 17 |
small intestine | 2.94e-11 | 4 |
gastrointestinal system | 1.03e-08 | 25 |
colon | 7.48e-07 | 9 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.14e-26 | 2 |