FFCP PHASE1:Hg19::chr5:63510296..63510308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:63510296..63510308,+ | |||
|coexpression_cluster_id=C361 | |coexpression_cluster_id=C361 | ||
|description=CAGE_peak_at_chr5:63510296..63510308,+ | |description=CAGE_peak_at_chr5:63510296..63510308,+ | ||
|id=chr5:63510296..63510308,+ | |id=chr5:63510296..63510308,+ | ||
|ontology_enrichment_celltype=CL:0000047!6.83e-18!8;CL:0002605!1.43e-17!3;CL:0002319!2.52e-12!25;CL:0000540!4.25e-09!6;CL:0000031!4.25e-09!6;CL:0000404!4.25e-09!6;CL:0000128!8.50e-08!7;CL:0000126!8.50e-08!7;CL:0000127!8.50e-08!7;CL:0002453!8.50e-08!7 | |ontology_enrichment_celltype=CL:0000047!6.83e-18!8;CL:0002605!1.43e-17!3;CL:0002319!2.52e-12!25;CL:0000540!4.25e-09!6;CL:0000031!4.25e-09!6;CL:0000404!4.25e-09!6;CL:0000128!8.50e-08!7;CL:0000126!8.50e-08!7;CL:0000127!8.50e-08!7;CL:0002453!8.50e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.11e-34;2!CL:0002605;4.11e-23;3!CL:0002319;5.27e-22;25!CL:0000540;6.00e-12;6!CL:0000404;6.00e-12;6!CL:0000128;1.77e-10;7!CL:0000126;1.77e-10;7!CL:0000127;1.77e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.58e-33,8;CL:0002605,5.76e-23,3;CL:0002319,6.11e-22,25;CL:0000540,6.34e-12,6;CL:0000031,6.34e-12,6;CL:0000404,6.34e-12,6;CL:0000128,2.04e-10,7;CL:0000126,2.04e-10,7;CL:0000127,2.04e-10,7;CL:0002453,2.04e-10,7;CL:0000133,1.26e-09,59;CL:0000221,6.85e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;6.00e-12;6!CL:0000133;1.04e-08;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.73e-25!86;UBERON:0001017!3.26e-24!82;UBERON:0000073!1.70e-22!94;UBERON:0001016!1.70e-22!94;UBERON:0002020!9.94e-20!34;UBERON:0003528!9.94e-20!34;UBERON:0000956!5.35e-19!25;UBERON:0000203!5.35e-19!25;UBERON:0001049!1.08e-17!57;UBERON:0005068!1.08e-17!57;UBERON:0006241!1.08e-17!57;UBERON:0007135!1.08e-17!57;UBERON:0001869!1.18e-17!32;UBERON:0002791!4.49e-17!33;UBERON:0001893!1.58e-16!34;UBERON:0002780!4.03e-16!41;UBERON:0001890!4.03e-16!41;UBERON:0006240!4.03e-16!41;UBERON:0003080!1.08e-15!42;UBERON:0002616!1.18e-14!59;UBERON:0003075!3.26e-14!86;UBERON:0007284!3.26e-14!86;UBERON:0003056!3.88e-14!61;UBERON:0000955!6.00e-14!69;UBERON:0006238!6.00e-14!69;UBERON:0002346!1.98e-13!90;UBERON:0004121!6.96e-12!169;UBERON:0001950!1.39e-11!20;UBERON:0000924!1.68e-11!173;UBERON:0006601!1.68e-11!173;UBERON:0002619!1.68e-10!22;UBERON:0000033!4.17e-10!123;UBERON:0000153!1.80e-09!129;UBERON:0007811!1.80e-09!129;UBERON:0007023!2.98e-07!115;UBERON:0002079!6.24e-07!1;UBERON:0000989!7.39e-07!1;UBERON:0008811!7.39e-07!1;UBERON:0006258!7.39e-07!1;UBERON:0005876!7.39e-07!1;UBERON:0004874!7.39e-07!1;UBERON:0001000!7.82e-07!1;UBERON:0005352!7.82e-07!1 | |ontology_enrichment_uberon=UBERON:0005743!2.73e-25!86;UBERON:0001017!3.26e-24!82;UBERON:0000073!1.70e-22!94;UBERON:0001016!1.70e-22!94;UBERON:0002020!9.94e-20!34;UBERON:0003528!9.94e-20!34;UBERON:0000956!5.35e-19!25;UBERON:0000203!5.35e-19!25;UBERON:0001049!1.08e-17!57;UBERON:0005068!1.08e-17!57;UBERON:0006241!1.08e-17!57;UBERON:0007135!1.08e-17!57;UBERON:0001869!1.18e-17!32;UBERON:0002791!4.49e-17!33;UBERON:0001893!1.58e-16!34;UBERON:0002780!4.03e-16!41;UBERON:0001890!4.03e-16!41;UBERON:0006240!4.03e-16!41;UBERON:0003080!1.08e-15!42;UBERON:0002616!1.18e-14!59;UBERON:0003075!3.26e-14!86;UBERON:0007284!3.26e-14!86;UBERON:0003056!3.88e-14!61;UBERON:0000955!6.00e-14!69;UBERON:0006238!6.00e-14!69;UBERON:0002346!1.98e-13!90;UBERON:0004121!6.96e-12!169;UBERON:0001950!1.39e-11!20;UBERON:0000924!1.68e-11!173;UBERON:0006601!1.68e-11!173;UBERON:0002619!1.68e-10!22;UBERON:0000033!4.17e-10!123;UBERON:0000153!1.80e-09!129;UBERON:0007811!1.80e-09!129;UBERON:0007023!2.98e-07!115;UBERON:0002079!6.24e-07!1;UBERON:0000989!7.39e-07!1;UBERON:0008811!7.39e-07!1;UBERON:0006258!7.39e-07!1;UBERON:0005876!7.39e-07!1;UBERON:0004874!7.39e-07!1;UBERON:0001000!7.82e-07!1;UBERON:0005352!7.82e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;8.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.17e-12,81;UBERON:0001016,5.67e-11,89;UBERON:0004121,5.46e-07,171;UBERON:0000924,5.46e-07,171;UBERON:0006601,5.46e-07,171;UBERON:0002114,9.12e-07,2 | |||
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|short_description=p@chr5:63510296..63510308,+ | |short_description=p@chr5:63510296..63510308,+ | ||
}} | }} |
Latest revision as of 15:41, 30 July 2015
Short description: | p@chr5:63510296..63510308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:63510296..63510308, + |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.58e-33 | 8 |
astrocyte of the cerebral cortex | 5.76e-23 | 3 |
neural cell | 6.11e-22 | 25 |
neuron | 6.34e-12 | 6 |
neuroblast | 6.34e-12 | 6 |
electrically signaling cell | 6.34e-12 | 6 |
oligodendrocyte | 2.04e-10 | 7 |
macroglial cell | 2.04e-10 | 7 |
astrocyte | 2.04e-10 | 7 |
oligodendrocyte precursor cell | 2.04e-10 | 7 |
neurectodermal cell | 1.26e-09 | 59 |
ectodermal cell | 6.85e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.17e-12 | 81 |
nervous system | 5.67e-11 | 89 |
ectoderm-derived structure | 5.46e-07 | 171 |
ectoderm | 5.46e-07 | 171 |
presumptive ectoderm | 5.46e-07 | 171 |
duodenum | 9.12e-07 | 2 |