FFCP PHASE1:Hg19::chr6:152792795..152792816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:152792795..152792816,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr6:152792795..152792816,- | |description=CAGE_peak_at_chr6:152792795..152792816,- | ||
|id=chr6:152792795..152792816,- | |id=chr6:152792795..152792816,- | ||
|ontology_enrichment_celltype=CL:0002620!2.07e-12!23;CL:0000057!1.62e-10!75;CL:0000153!1.07e-07!9;CL:0000447!1.07e-07!9;CL:0002334!7.71e-07!12;CL:0000055!8.96e-07!180 | |ontology_enrichment_celltype=CL:0002620!2.07e-12!23;CL:0000057!1.62e-10!75;CL:0000153!1.07e-07!9;CL:0000447!1.07e-07!9;CL:0002334!7.71e-07!12;CL:0000055!8.96e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.78e-18;6!CL:0000319;5.70e-13;1!CL:0000327;8.58e-13;15!CL:0000153;2.14e-12;9!CL:0000447;2.14e-12;9!CL:0000197;1.08e-08;6!CL:0000098;1.08e-08;6!CL:0002167;1.08e-08;6!CL:0000159;4.04e-07;2!CL:0000499;6.02e-07;28!CL:0000151;7.06e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.96e-18,6;CL:0000138,3.96e-18,6;CL:0000319,4.23e-13,1;CL:0000327,8.72e-13,15;CL:0000153,2.71e-12,9;CL:0000447,2.71e-12,9;CL:0000197,1.36e-08,6;CL:0000098,1.36e-08,6;CL:0002167,1.36e-08,6;CL:0000151,4.36e-08,36;CL:0000159,3.48e-07,2;CL:0000499,6.08e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.61e-13;1!DOID:4549;1.61e-13;1!DOID:5861;1.61e-13;1!DOID:6496;1.61e-13;1!DOID:2513;1.82e-13;1!DOID:4235;2.05e-13;1!DOID:3030;5.70e-13;1!DOID:3571;5.70e-13;1!DOID:3451;2.28e-07;2!DOID:4159;2.28e-07;2!DOID:0060122;2.28e-07;2!DOID:3350;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.61e-13,1;DOID:4549,1.61e-13,1;DOID:5861,1.61e-13,1;DOID:6496,1.61e-13,1;DOID:2513,1.82e-13,1;DOID:4235,2.06e-13,1;DOID:3571,2.95e-13,1;DOID:3030,4.23e-13,1;DOID:3451,2.28e-07,2;DOID:4159,2.28e-07,2;DOID:0060122,2.28e-07,2;DOID:3350,2.91e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002619!3.55e-12!22;UBERON:0001893!6.30e-12!34;UBERON:0001869!1.55e-11!32;UBERON:0002791!6.85e-11!33;UBERON:0007023!1.05e-10!115;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0000956!2.32e-10!25;UBERON:0000203!2.32e-10!25;UBERON:0003080!3.85e-10!42;UBERON:0000475!6.85e-10!365;UBERON:0001950!8.54e-10!20;UBERON:0000349!2.38e-09!5;UBERON:0002020!3.01e-09!34;UBERON:0003528!3.01e-09!34;UBERON:0001049!4.49e-09!57;UBERON:0005068!4.49e-09!57;UBERON:0006241!4.49e-09!57;UBERON:0007135!4.49e-09!57;UBERON:0002616!1.37e-08!59;UBERON:0000955!3.76e-08!69;UBERON:0006238!3.76e-08!69;UBERON:0002097!5.11e-08!40;UBERON:0002199!1.20e-07!45;UBERON:0002416!1.20e-07!45;UBERON:0001017!2.13e-07!82;UBERON:0005743!8.69e-07!86 | |ontology_enrichment_uberon=UBERON:0002619!3.55e-12!22;UBERON:0001893!6.30e-12!34;UBERON:0001869!1.55e-11!32;UBERON:0002791!6.85e-11!33;UBERON:0007023!1.05e-10!115;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0000956!2.32e-10!25;UBERON:0000203!2.32e-10!25;UBERON:0003080!3.85e-10!42;UBERON:0000475!6.85e-10!365;UBERON:0001950!8.54e-10!20;UBERON:0000349!2.38e-09!5;UBERON:0002020!3.01e-09!34;UBERON:0003528!3.01e-09!34;UBERON:0001049!4.49e-09!57;UBERON:0005068!4.49e-09!57;UBERON:0006241!4.49e-09!57;UBERON:0007135!4.49e-09!57;UBERON:0002616!1.37e-08!59;UBERON:0000955!3.76e-08!69;UBERON:0006238!3.76e-08!69;UBERON:0002097!5.11e-08!40;UBERON:0002199!1.20e-07!45;UBERON:0002416!1.20e-07!45;UBERON:0001017!2.13e-07!82;UBERON:0005743!8.69e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.08e-08;6!UBERON:0002358;1.08e-08;6!UBERON:0003684;1.08e-08;6!UBERON:0001178;1.08e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.13e-08,6;UBERON:0002358,1.13e-08,6;UBERON:0003684,1.13e-08,6;UBERON:0001178,1.13e-08,6 | |||
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| ||
|short_description=p@chr6:152792795..152792816,- | |short_description=p@chr6:152792795..152792816,- | ||
}} | }} |
Latest revision as of 21:05, 30 July 2015
Short description: | p@chr6:152792795..152792816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:152792795..152792816, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.96e-18 | 6 |
chondrocyte | 3.96e-18 | 6 |
mucus secreting cell | 4.23e-13 | 1 |
extracellular matrix secreting cell | 8.72e-13 | 15 |
GAG secreting cell | 2.71e-12 | 9 |
carbohydrate secreting cell | 2.71e-12 | 9 |
receptor cell | 1.36e-08 | 6 |
sensory epithelial cell | 1.36e-08 | 6 |
olfactory epithelial cell | 1.36e-08 | 6 |
secretory cell | 4.36e-08 | 36 |
seromucus secreting cell | 3.48e-07 | 2 |
stromal cell | 6.08e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.13e-08 | 6 |
peritoneum | 1.13e-08 | 6 |
abdominal cavity | 1.13e-08 | 6 |
visceral peritoneum | 1.13e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.61e-13 | 1 |
extraosseous chondrosarcoma | 1.61e-13 | 1 |
myxoid chondrosarcoma | 1.61e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.61e-13 | 1 |
basal cell carcinoma | 1.82e-13 | 1 |
spindle cell sarcoma | 2.06e-13 | 1 |
liver cancer | 2.95e-13 | 1 |
mucinous adenocarcinoma | 4.23e-13 | 1 |
skin carcinoma | 2.28e-07 | 2 |
skin cancer | 2.28e-07 | 2 |
integumentary system cancer | 2.28e-07 | 2 |
mesenchymal cell neoplasm | 2.91e-07 | 2 |