FFCP PHASE1:Hg19::chr6:154177504..154177515,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:154177504..154177515,- | |||
|description=CAGE_peak_at_chr6:154177504..154177515,- | |||
|id=chr6:154177504..154177515,- | |||
|ontology_enrichment_celltype=CL:0000313!7.18e-09!1;CL:0000062!8.62e-07!11;CL:0000375!8.62e-07!11;CL:0000335!8.62e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000062;6.87e-11;9!CL:0002178;1.04e-08;3!CL:0000214;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.43e-09,11;CL:0000375,4.43e-09,11;CL:0000335,4.43e-09,11;CL:0002178,1.12e-08,3;CL:0000214,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.27e-10;10!UBERON:0005564;8.27e-10;10!CL:0000335;4.43e-09;11 | |||
|ontology_enrichment_disease=DOID:2152!7.18e-09!1;DOID:0050619!7.75e-09!1;DOID:1357!7.75e-09!1;DOID:0050687!7.97e-09!143;DOID:6193!8.36e-09!1;DOID:0060085!1.13e-08!1;DOID:3165!1.13e-08!1;DOID:0060121!1.13e-08!1;DOID:2438!1.13e-08!1;DOID:4418!1.13e-08!1;DOID:305!6.90e-08!106;DOID:162!8.96e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.07e-12;2!DOID:3493;2.07e-12;2!DOID:299;1.36e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.85e-12,2;DOID:3493,2.32e-12,2;DOID:299,1.41e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004911!7.18e-09!1;UBERON:0001764!7.75e-09!1;UBERON:0001825!7.75e-09!1;UBERON:0001282!1.78e-08!1;UBERON:0009842!1.78e-08!1;UBERON:0003704!1.78e-08!1;UBERON:0001171!1.78e-08!1;UBERON:0001172!1.78e-08!1;UBERON:0003343!4.80e-08!4;UBERON:0004785!4.80e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.08e-12;8!UBERON:0003135;5.31e-09;11!UBERON:0006915;1.35e-08;3!UBERON:0007616;1.35e-08;3!UBERON:0002217;1.35e-08;3!UBERON:0002018;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-12,8;UBERON:0003135,5.41e-09,11;UBERON:0006915,1.21e-08,3;UBERON:0007616,1.21e-08,3;UBERON:0002217,1.21e-08,3;UBERON:0002018,1.21e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65551447973196,4.45551299571175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77495773870551,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0,0.671132590786754,2.65005630761156,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,3.7514978221865,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:154177504..154177515,- | |||
}} |
Latest revision as of 21:09, 30 July 2015
Short description: | p@chr6:154177504..154177515, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:154177504..154177515, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.43e-09 | 11 |
osteoprogenitor cell | 4.43e-09 | 11 |
mesenchyme condensation cell | 4.43e-09 | 11 |
epithelial cell of stomach | 1.12e-08 | 3 |
synovial cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-12 | 8 |
male reproductive organ | 5.41e-09 | 11 |
stratified squamous epithelium | 1.21e-08 | 3 |
layer of synovial tissue | 1.21e-08 | 3 |
synovial joint | 1.21e-08 | 3 |
synovial membrane of synovial joint | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.85e-12 | 2 |
signet ring cell adenocarcinoma | 2.32e-12 | 2 |
adenocarcinoma | 1.41e-08 | 25 |