FFCP PHASE1:Hg19::chr6:25138806..25138863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=8418 | |EntrezGene=entrezgene:8418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=2098 | |HGNC=HGNC:2098 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000377989,uc003neu.1_5end | |association_with_transcript=0bp_to_ENST00000377989,uc003neu.1_5end | ||
|cluster_id=chr6:25138806..25138863,- | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_5_at_CMAHP_5end | |description=CAGE_peak_5_at_CMAHP_5end | ||
Revision as of 22:51, 30 July 2015
| Short description: | p5@CMAHP |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_CMAHP_5end |
| Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
| Association with transcript: | 0bp_to_ENST00000377989, uc003neu.1_5end |
| EntrezGene: | 8418 |
| HGNC: | 2098 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@CMAHP |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 4.23e-25 | 52 |
| lymphocyte | 2.20e-24 | 53 |
| common lymphoid progenitor | 2.20e-24 | 53 |
| B cell | 4.33e-18 | 14 |
| lymphocyte of B lineage | 8.17e-16 | 24 |
| pro-B cell | 8.17e-16 | 24 |
| nongranular leukocyte | 3.62e-15 | 115 |
| hematopoietic lineage restricted progenitor cell | 4.08e-13 | 120 |
| leukocyte | 5.59e-12 | 136 |
| hematopoietic stem cell | 1.04e-09 | 168 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 6.48e-08 | 114 |
Showing 1 to 1 of 1 entries
