FFCP PHASE1:Hg19::chr6:31083761..31083775,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:31083761..31083775,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr6:31083761..31083775,- | |||
|id=chr6:31083761..31083775,- | |||
|ontology_enrichment_celltype=CL:0000349!5.23e-23!3;CL:0002577!5.23e-23!3;CL:0002541!2.61e-22!3;CL:0002536!3.72e-15!2;CL:0002537!3.76e-14!5;CL:0000622!8.17e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.43e-73;19!CL:0002577;6.57e-66;3!CL:0002537;2.55e-40;5!CL:0002541;3.59e-30;3!CL:0002623;1.17e-08;3!CL:0000134;2.00e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.54e-73,19;CL:0002577,5.88e-66,3;CL:0002537,2.55e-40,5;CL:0002541,4.17e-30,3;CL:0002623,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!2.64e-08!1;DOID:5093!6.95e-08!4;DOID:1612!6.95e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.07e-61!14;UBERON:0000158!3.07e-61!14;UBERON:0003124!3.09e-37!7;UBERON:0000478!5.96e-35!24;UBERON:0000305!4.38e-26!7;UBERON:0004871!8.18e-23!8;UBERON:0000476!2.61e-22!3;UBERON:0000920!2.61e-22!3;UBERON:0004923!4.40e-19!57;UBERON:0001987!2.09e-17!4;UBERON:0004340!2.09e-17!4;UBERON:0000989!1.59e-08!1;UBERON:0008811!1.59e-08!1;UBERON:0006258!1.59e-08!1;UBERON:0005876!1.59e-08!1;UBERON:0004874!1.59e-08!1;UBERON:0002146!2.13e-08!1;UBERON:0005623!2.13e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.22e-58;24!UBERON:0005631;5.69e-55;10!UBERON:0000158;5.69e-55;10!UBERON:0001987;1.10e-49;4!UBERON:0003124;3.59e-30;3!UBERON:0000920;3.59e-30;3!UBERON:0000305;4.66e-29;7!UBERON:0000077;5.57e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.03e-99,14;UBERON:0000158,2.03e-99,14;UBERON:0003124,8.34e-78,7;UBERON:0000478,4.38e-58,24;UBERON:0001987,1.01e-49,4;UBERON:0004340,1.01e-49,4;UBERON:0000920,4.17e-30,3;UBERON:0000305,4.66e-29,7;UBERON:0004871,1.56e-25,8;UBERON:0004923,3.88e-21,66;UBERON:0000995,4.30e-10,21;UBERON:0005795,1.16e-09,22;UBERON:0003975,1.16e-09,22;UBERON:0004175,1.41e-08,25;UBERON:0000077,1.78e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03127571446259,1.66435439510497,4.23346410661552,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1896029011137,1.18785872333055,12.9007494881677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33702667383415,0.0915975934018623,1.06606955203727,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45629830907046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:31083761..31083775,- | |||
}} |
Latest revision as of 23:48, 30 July 2015
Short description: | p@chr6:31083761..31083775, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31083761..31083775, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.54e-73 | 19 |
placental epithelial cell | 5.88e-66 | 3 |
amnion mesenchymal stem cell | 2.55e-40 | 5 |
chorionic membrane mesenchymal stem cell | 4.17e-30 | 3 |
acinar cell of salivary gland | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.03e-99 | 14 |
membranous layer | 2.03e-99 | 14 |
chorion | 8.34e-78 | 7 |
extraembryonic structure | 4.38e-58 | 24 |
placenta | 1.01e-49 | 4 |
allantois | 1.01e-49 | 4 |
egg chorion | 4.17e-30 | 3 |
amnion | 4.66e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.56e-25 | 8 |
organ component layer | 3.88e-21 | 66 |
uterus | 4.30e-10 | 21 |
embryonic uterus | 1.16e-09 | 22 |
internal female genitalia | 1.16e-09 | 22 |
internal genitalia | 1.41e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 1.78e-07 | 29 |