FFCP PHASE1:Hg19::chr6:4610888..4610895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000380106_5end | |association_with_transcript=0bp_to_ENST00000380106_5end | ||
|cluster_id=chr6:4610888..4610895,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_ENST00000380106_5end | |description=CAGE_peak_2_at_ENST00000380106_5end | ||
|id=chr6:4610888..4610895,+ | |id=chr6:4610888..4610895,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.31e-26!10;CL:0000541!1.31e-26!10;CL:0000147!7.14e-19!14;CL:0000710!4.68e-13!20;CL:0002567!5.06e-11!3;CL:0000075!1.58e-09!27;CL:0002566!6.50e-09!1;CL:0000313!8.78e-09!1;CL:0000325!1.54e-08!39;CL:0002557!3.28e-08!1;CL:0002077!1.08e-07!33 | |ontology_enrichment_celltype=CL:0000148!1.31e-26!10;CL:0000541!1.31e-26!10;CL:0000147!7.14e-19!14;CL:0000710!4.68e-13!20;CL:0002567!5.06e-11!3;CL:0000075!1.58e-09!27;CL:0002566!6.50e-09!1;CL:0000313!8.78e-09!1;CL:0000325!1.54e-08!39;CL:0002557!3.28e-08!1;CL:0002077!1.08e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.29e-117;10!CL:0000147;2.84e-84;14!CL:0000710;3.03e-59;20!CL:0002567;1.53e-44;3!CL:0000075;4.38e-44;27!CL:0002566;3.61e-34;1!CL:0002077;7.67e-33;34!CL:0000149;1.32e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.29e-117,10;CL:0000541,1.29e-117,10;CL:0000147,2.84e-84,14;CL:0000710,3.03e-59,20;CL:0002567,1.22e-44,3;CL:0000075,4.38e-44,27;CL:0002077,3.73e-35,34;CL:0002566,3.61e-34,1;CL:0000333,6.20e-28,41;CL:0000133,7.27e-20,59;CL:0000221,1.82e-16,72;CL:0000149,1.44e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;8.54e-11;59!CL:0000221;4.27e-09;72 | |||
|ontology_enrichment_disease=DOID:1909!1.94e-15!2;DOID:2152!8.78e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004911!8.78e-09!1;UBERON:0006834!3.06e-08!1;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0002465!5.84e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@ENST00000380106 | |short_description=p2@ENST00000380106 | ||
}} | }} |
Latest revision as of 02:05, 31 July 2015
Short description: | p2@ENST00000380106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000380106_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000380106_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.29e-117 | 10 |
melanoblast | 1.29e-117 | 10 |
pigment cell | 2.84e-84 | 14 |
neurecto-epithelial cell | 3.03e-59 | 20 |
light melanocyte | 1.22e-44 | 3 |
columnar/cuboidal epithelial cell | 4.38e-44 | 27 |
ecto-epithelial cell | 3.73e-35 | 34 |
dark melanocyte | 3.61e-34 | 1 |
migratory neural crest cell | 6.20e-28 | 41 |
neurectodermal cell | 7.27e-20 | 59 |
ectodermal cell | 1.82e-16 | 72 |
visual pigment cell | 1.44e-09 | 4 |