FFCP PHASE1:Hg19::chr6:4610902..4610913,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000380106_5end | |association_with_transcript=12bp_to_ENST00000380106_5end | ||
|cluster_id=chr6:4610902..4610913,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_1_at_ENST00000380106_5end | |description=CAGE_peak_1_at_ENST00000380106_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!1.07e-33!10;CL:0000541!1.07e-33!10;CL:0000147!7.69e-24!14;CL:0002567!9.79e-22!3;CL:0000710!1.96e-16!20;CL:0000075!6.02e-12!27;CL:0005020!1.14e-10!6;CL:0002138!1.14e-10!6;CL:0005022!1.14e-10!6;CL:0002077!1.30e-09!33;CL:0002566!1.91e-08!1;CL:0000313!3.34e-08!1;CL:0000325!5.37e-08!39;CL:0002557!9.29e-08!1;CL:0000333!3.60e-07!41;CL:0002139!8.43e-07!24 | |ontology_enrichment_celltype=CL:0000148!1.07e-33!10;CL:0000541!1.07e-33!10;CL:0000147!7.69e-24!14;CL:0002567!9.79e-22!3;CL:0000710!1.96e-16!20;CL:0000075!6.02e-12!27;CL:0005020!1.14e-10!6;CL:0002138!1.14e-10!6;CL:0005022!1.14e-10!6;CL:0002077!1.30e-09!33;CL:0002566!1.91e-08!1;CL:0000313!3.34e-08!1;CL:0000325!5.37e-08!39;CL:0002557!9.29e-08!1;CL:0000333!3.60e-07!41;CL:0002139!8.43e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;1.97e-84;3!CL:0000710;7.68e-69;20!CL:0000075;3.82e-51;27!CL:0002077;8.13e-36;34!CL:0002566;1.33e-29;1!CL:0000149;2.11e-08;4 | |ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;1.97e-84;3!CL:0000710;7.68e-69;20!CL:0000075;3.82e-51;27!CL:0002077;8.13e-36;34!CL:0002566;1.33e-29;1!CL:0000149;2.11e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.38e-137,10;CL:0000541,5.38e-137,10;CL:0000147,4.60e-98,14;CL:0002567,2.27e-84,3;CL:0000710,7.68e-69,20;CL:0000075,3.82e-51,27;CL:0002077,1.01e-40,34;CL:0000333,2.68e-32,41;CL:0002566,1.33e-29,1;CL:0000133,6.93e-23,59;CL:0000221,6.34e-19,72;CL:0000149,2.11e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.00e-12;59!CL:0000221;2.96e-10;72 | |ontology_enrichment_development_v019=CL:0000133;3.00e-12;59!CL:0000221;2.96e-10;72 | ||
|ontology_enrichment_disease=DOID:1909!1.37e-14!2;DOID:2152!3.34e-08!1;DOID:3369!3.58e-08!1 | |ontology_enrichment_disease=DOID:1909!1.37e-14!2;DOID:2152!3.34e-08!1;DOID:3369!3.58e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004911!3.34e-08!1;UBERON:0007029!3.83e-08!1;UBERON:0001473!4.04e-08!8;UBERON:0004536!4.04e-08!8;UBERON:0006558!4.04e-08!8;UBERON:0006834!5.40e-08!1;UBERON:0002902!1.14e-07!1;UBERON:0009899!1.14e-07!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1 | |ontology_enrichment_uberon=UBERON:0004911!3.34e-08!1;UBERON:0007029!3.83e-08!1;UBERON:0001473!4.04e-08!8;UBERON:0004536!4.04e-08!8;UBERON:0006558!4.04e-08!8;UBERON:0006834!5.40e-08!1;UBERON:0002902!1.14e-07!1;UBERON:0009899!1.14e-07!1;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7946420296687,4.96584953225761,16.4104426094066,1.71072446022705,1.7480673759565,6.00686115687835,27.4393375325355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7946420296687,4.96584953225761,16.4104426094066,1.71072446022705,1.7480673759565,6.00686115687835,27.4393375325355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@ENST00000380106 | |short_description=p1@ENST00000380106 | ||
}} | }} |
Latest revision as of 02:05, 31 July 2015
Short description: | p1@ENST00000380106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000380106_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 12bp_to_ENST00000380106_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.38e-137 | 10 |
melanoblast | 5.38e-137 | 10 |
pigment cell | 4.60e-98 | 14 |
light melanocyte | 2.27e-84 | 3 |
neurecto-epithelial cell | 7.68e-69 | 20 |
columnar/cuboidal epithelial cell | 3.82e-51 | 27 |
ecto-epithelial cell | 1.01e-40 | 34 |
migratory neural crest cell | 2.68e-32 | 41 |
dark melanocyte | 1.33e-29 | 1 |
neurectodermal cell | 6.93e-23 | 59 |
ectodermal cell | 6.34e-19 | 72 |
visual pigment cell | 2.11e-08 | 4 |