FFCP PHASE1:Hg19::chr6:54666656..54666670,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:54666656..54666670,- | |||
|description=CAGE_peak_at_chr6:54666656..54666670,- | |||
|id=chr6:54666656..54666670,- | |||
|ontology_enrichment_celltype=CL:0002586!4.23e-09!3;CL:0000149!6.91e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.21e-08;3!CL:0002178;1.21e-08;3!CL:0000149;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.66e-09,3;CL:0002586,1.21e-08,3;CL:0000149,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.59e-12;2!DOID:4556;1.21e-08;3!DOID:3119;3.14e-07;14!DOID:1749;3.14e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2;DOID:4556,1.04e-08,3;DOID:3119,2.95e-07,14;DOID:1749,3.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002020!1.48e-13!34;UBERON:0003528!1.48e-13!34;UBERON:0001869!1.69e-12!32;UBERON:0001893!1.41e-11!34;UBERON:0005743!1.80e-11!86;UBERON:0000073!7.19e-11!94;UBERON:0001016!7.19e-11!94;UBERON:0002791!2.26e-10!33;UBERON:0003056!3.21e-09!61;UBERON:0000955!3.47e-09!69;UBERON:0006238!3.47e-09!69;UBERON:0001781!4.23e-09!3;UBERON:0001782!4.23e-09!3;UBERON:0005424!4.23e-09!3;UBERON:0002780!4.69e-09!41;UBERON:0001890!4.69e-09!41;UBERON:0006240!4.69e-09!41;UBERON:0001017!7.87e-09!82;UBERON:0003080!9.17e-09!42;UBERON:0001049!1.12e-08!57;UBERON:0005068!1.12e-08!57;UBERON:0006241!1.12e-08!57;UBERON:0007135!1.12e-08!57;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0000033!1.63e-08!123;UBERON:0000956!2.21e-08!25;UBERON:0000203!2.21e-08!25;UBERON:0002616!3.01e-08!59;UBERON:0002619!4.91e-08!22;UBERON:0002346!4.96e-08!90;UBERON:0000153!8.20e-08!129;UBERON:0007811!8.20e-08!129;UBERON:0002771!1.37e-07!3;UBERON:0005409!2.59e-07!35;UBERON:0002308!3.52e-07!9;UBERON:0000125!3.52e-07!9;UBERON:0001950!4.48e-07!20;UBERON:0001871!6.17e-07!7;UBERON:0000481!7.30e-07!347;UBERON:0000160!8.29e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;3.28e-23;1!UBERON:0001781;1.21e-08;3!UBERON:0001782;1.21e-08;3!UBERON:0005383;1.21e-08;3!UBERON:0005382;1.21e-08;3!UBERON:0001052;8.61e-07;4!UBERON:0000369;8.61e-07;4!UBERON:0002435;8.61e-07;4!UBERON:0000204;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.62e-23,1;UBERON:0005383,1.12e-08,3;UBERON:0005382,1.12e-08,3;UBERON:0001782,1.21e-08,3;UBERON:0005424,1.21e-08,3;UBERON:0000369,8.14e-07,4;UBERON:0002435,8.14e-07,4;UBERON:0000204,8.14e-07,4;UBERON:0010082,8.14e-07,4;UBERON:0001781,8.61e-07,4;UBERON:0001052,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0.656029291399411,0.976135183992909,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,2.55549813004637,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0.288180834308212,0,0,5.47408232354969,0.621262677827163,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0.422624246717254,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0.138314504928436,0.322951291263702,0,0.490738592505128,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,1.41404030924402,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0,0,0,0,0,0,1.76670420507437,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,1.05868461514708,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.426909383510862,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr6:54666656..54666670,- | |||
}} |
Latest revision as of 02:26, 31 July 2015
Short description: | p@chr6:54666656..54666670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:54666656..54666670, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.66e-09 | 3 |
retinal pigment epithelial cell | 1.21e-08 | 3 |
visual pigment cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
putamen | 2.62e-23 | 1 |
caudate-putamen | 1.12e-08 | 3 |
dorsal striatum | 1.12e-08 | 3 |
pigmented layer of retina | 1.21e-08 | 3 |
presumptive retinal pigmented epithelium | 1.21e-08 | 3 |
corpus striatum | 8.14e-07 | 4 |
striatum | 8.14e-07 | 4 |
ventral part of telencephalon | 8.14e-07 | 4 |
future corpus striatum | 8.14e-07 | 4 |
layer of retina | 8.61e-07 | 4 |
rectum | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.85e-12 | 2 |
lung large cell carcinoma | 1.04e-08 | 3 |
gastrointestinal system cancer | 2.95e-07 | 14 |
squamous cell carcinoma | 3.14e-07 | 14 |