FFCP PHASE1:Hg19::chr6:66969216..66969240,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:66969216..66969240,+
|short_description=p@chr6:66969216..66969240,+
|description=CAGE_peak_at_chr6:66969216..66969240,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:66969216..66969240,+ | |||
|coexpression_cluster_id=C4623 | |||
|description=CAGE_peak_at_chr6:66969216..66969240,+ | |||
|id=chr6:66969216..66969240,+ | |||
|ontology_enrichment_celltype=CL:0000076!5.43e-10!62;CL:0000317!3.25e-09!2;CL:1000448!3.25e-09!2;CL:0002308!3.25e-09!2;CL:0002140!3.25e-09!2;CL:0000362!3.24e-08!8;CL:0000066!1.10e-07!254;CL:0002076!1.23e-07!43;CL:0000223!1.74e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.91e-18!14;DOID:0050687!3.12e-11!143;DOID:305!4.22e-11!106;DOID:162!7.75e-11!235;DOID:14566!1.84e-10!239;DOID:3493!9.14e-10!2;DOID:7!9.64e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.03e-18;2!DOID:1749;6.41e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.65e-18,2;DOID:1749,6.41e-16,14;DOID:0050687,7.52e-13,143;DOID:305,1.13e-11,106;DOID:162,3.29e-10,235;DOID:14566,6.25e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.12e-16!4;UBERON:0004785!1.12e-16!4;UBERON:0003729!2.27e-13!5;UBERON:0002419!3.25e-09!2;UBERON:0007771!3.25e-09!2;UBERON:0003297!3.25e-09!2;UBERON:0001821!3.25e-09!2;UBERON:0003487!3.25e-09!2;UBERON:0001820!3.25e-09!2;UBERON:0005089!3.25e-09!2;UBERON:0005088!3.25e-09!2;UBERON:0000344!2.87e-08!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.79e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76161217055386,5.94068399428233,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7774258493143,0,98.2611266083937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,1.78309414843965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52776196950456,0,0,0,0,4.44547960578548,0,0,0,0,0,0,47.7932482799099,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,5.08728009223433,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,10.2619258029723,0,0,7.48709176591462,0,0,0,0,0,0,0,0,2.32971271899477,0.993573058514948,0,0,0,0,0,0,0,0,3.02515075775114,0,0,26.6372243904284,27.615151426456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,7.36423801007363,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.7423704650302,0.11796972334774,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11231401892069,0,0,0,0,11.6600899258056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,2.84635677484205,6.46165002406028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35210769088245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76161217055386,5.94068399428233,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7774258493143,0,98.2611266083937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,1.78309414843965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52776196950456,0,0,0,0,4.44547960578548,0,0,0,0,0,0,47.7932482799099,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,5.08728009223433,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,10.2619258029723,0,0,7.48709176591462,0,0,0,0,0,0,0,0,2.32971271899477,0.993573058514948,0,0,0,0,0,0,0,0,3.02515075775114,0,0,26.6372243904284,27.615151426456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,7.36423801007363,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.7423704650302,0.11796972334774,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11231401892069,0,0,0,0,11.6600899258056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,2.84635677484205,6.46165002406028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35210769088245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:66969216..66969240,+ | |||
}} | }} |
Latest revision as of 02:45, 31 July 2015
Short description: | p@chr6:66969216..66969240, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:66969216..66969240, + |
Coexpression cluster: | C4623_acantholytic_oral_bronchial_glioblastoma_renal_Saos2_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.79e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.65e-18 | 2 |
squamous cell carcinoma | 6.41e-16 | 14 |
cell type cancer | 7.52e-13 | 143 |
carcinoma | 1.13e-11 | 106 |
cancer | 3.29e-10 | 235 |
disease of cellular proliferation | 6.25e-10 | 239 |