FFCP PHASE1:Hg19::chr6:6739548..6739577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:6739548..6739577,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr6:6739548..6739577,- | |description=CAGE_peak_at_chr6:6739548..6739577,- | ||
|id=chr6:6739548..6739577,- | |id=chr6:6739548..6739577,- | ||
|ontology_enrichment_celltype=CL:0002174!6.23e-18!1;CL:0000501!6.23e-18!1;CL:0000174!7.70e-07!3 | |ontology_enrichment_celltype=CL:0002174!6.23e-18!1;CL:0000501!6.23e-18!1;CL:0000174!7.70e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0005062;4.67e-66;4!UBERON:0007284;4.67e-66;4!UBERON:0004872;8.16e-11;7!UBERON:0003104;2.91e-09;31!UBERON:0006603;2.92e-07;65 | |||
|ontology_enrichment_disease=DOID:114!1.33e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!2.10e-23!3;UBERON:0009751!2.10e-23!3;UBERON:0000946!2.10e-23!3;UBERON:0002523!2.10e-23!3;UBERON:0005983!2.10e-23!3;UBERON:0002165!2.10e-23!3;UBERON:0002062!2.10e-23!3;UBERON:0007280!2.10e-23!3;UBERON:0002146!3.16e-18!1;UBERON:0005623!3.16e-18!1;UBERON:0002135!3.75e-18!1;UBERON:0002022!1.70e-17!1;UBERON:0007100!1.40e-15!27;UBERON:0002133!9.46e-10!2;UBERON:0001870!1.86e-09!2;UBERON:0001950!1.41e-07!20;UBERON:0002619!5.77e-07!22;UBERON:0000948!6.22e-07!24;UBERON:0005498!6.22e-07!24;UBERON:0004140!6.22e-07!24;UBERON:0009881!6.22e-07!24;UBERON:0004141!6.22e-07!24;UBERON:0003084!6.22e-07!24;UBERON:0007005!6.22e-07!24;UBERON:0004139!6.22e-07!24;UBERON:0004291!6.22e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.52e-87;3!UBERON:0000946;1.52e-87;3!UBERON:0002135;3.34e-66;1!UBERON:0002146;3.34e-66;1!UBERON:0005623;3.34e-66;1!UBERON:0002133;5.96e-34;2!UBERON:0000948;7.08e-28;22!UBERON:0010313;2.72e-27;10!UBERON:0007100;1.10e-24;25!UBERON:0003103;2.75e-09;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.52e-87,3;UBERON:0009751,1.52e-87,3;UBERON:0000946,1.52e-87,3;UBERON:0002523,1.52e-87,3;UBERON:0005983,1.52e-87,3;UBERON:0002165,1.52e-87,3;UBERON:0002062,1.52e-87,3;UBERON:0007280,1.52e-87,3;UBERON:0002146,2.39e-66,1;UBERON:0005623,2.39e-66,1;UBERON:0002135,4.66e-66,1;UBERON:0004797,2.18e-38,7;UBERON:0002133,7.05e-34,2;UBERON:0010313,2.72e-27,10;UBERON:0002342,2.72e-27,10;UBERON:0005062,2.72e-27,10;UBERON:0000948,1.16e-25,24;UBERON:0005498,1.16e-25,24;UBERON:0004140,1.16e-25,24;UBERON:0009881,1.16e-25,24;UBERON:0004141,1.16e-25,24;UBERON:0003084,1.16e-25,24;UBERON:0007005,1.16e-25,24;UBERON:0004139,1.16e-25,24;UBERON:0004291,1.16e-25,24;UBERON:0007100,5.98e-23,27;UBERON:0003103,8.58e-10,68;UBERON:0004872,3.31e-08,83 | |||
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|short_description=p@chr6:6739548..6739577,- | |short_description=p@chr6:6739548..6739577,- | ||
}} | }} |
Latest revision as of 02:46, 31 July 2015
Short description: | p@chr6:6739548..6739577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:6739548..6739577, - |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.52e-87 | 3 |
cardiac mesenchyme | 1.52e-87 | 3 |
cardial valve | 1.52e-87 | 3 |
tunica intima | 1.52e-87 | 3 |
heart layer | 1.52e-87 | 3 |
endocardium | 1.52e-87 | 3 |
endocardial cushion | 1.52e-87 | 3 |
presumptive endocardium | 1.52e-87 | 3 |
pulmonary valve | 2.39e-66 | 1 |
semi-lunar valve | 2.39e-66 | 1 |
mitral valve | 4.66e-66 | 1 |
blood vessel layer | 2.18e-38 | 7 |
atrioventricular valve | 7.05e-34 | 2 |
neural crest-derived structure | 2.72e-27 | 10 |
neural crest | 2.72e-27 | 10 |
neural fold | 2.72e-27 | 10 |
heart | 1.16e-25 | 24 |
primitive heart tube | 1.16e-25 | 24 |
primary heart field | 1.16e-25 | 24 |
anterior lateral plate mesoderm | 1.16e-25 | 24 |
heart tube | 1.16e-25 | 24 |
heart primordium | 1.16e-25 | 24 |
cardiac mesoderm | 1.16e-25 | 24 |
cardiogenic plate | 1.16e-25 | 24 |
heart rudiment | 1.16e-25 | 24 |
primary circulatory organ | 5.98e-23 | 27 |
compound organ | 8.58e-10 | 68 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |