FFCP PHASE1:Hg19::chr6:83075367..83075383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:83075367..83075383,- | |||
|description=CAGE_peak_at_chr6:83075367..83075383,- | |description=CAGE_peak_at_chr6:83075367..83075383,- | ||
|id=chr6:83075367..83075383,- | |id=chr6:83075367..83075383,- | ||
|ontology_enrichment_celltype=CL:0002368;5.37e-64;13!CL:0002202;1.95e-41;9!CL:0002632;1.95e-41;9!CL:0002328;2.17e-32;3!CL:0000307;1.18e-31;3!CL:0002327;2.17e-24;4!CL:0002076;1.88e-13;42 | |ontology_enrichment_celltype=CL:0002368!3.51e-24!13;CL:0000066!9.00e-20!254;CL:0002076!2.44e-19!43;CL:0002202!1.75e-14!9;CL:0002632!1.75e-14!9;CL:0000223!1.30e-12!59;CL:0002328!2.11e-09!3;CL:0000068!2.99e-09!3;CL:0000069!2.99e-09!3;CL:0000307!2.99e-09!3;CL:0000377!2.99e-09!3;CL:0002621!2.23e-08!3;CL:0002327!4.41e-07!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0002368;5.37e-64;13!CL:0002202;1.95e-41;9!CL:0002632;1.95e-41;9!CL:0002328;2.17e-32;3!CL:0000307;1.18e-31;3!CL:0002327;2.17e-24;4!CL:0002076;1.88e-13;42 | ||
|ontology_enrichment_disease=DOID:5093;7.99e-12;4!DOID:1612;7.99e-12;4 | |ontology_enrichment_celltype_v019_2=CL:0002368,4.82e-64,13;CL:0002202,2.09e-41,9;CL:0002632,2.09e-41,9;CL:0002328,2.68e-32,3;CL:0000068,1.07e-31,3;CL:0000069,1.07e-31,3;CL:0000307,1.07e-31,3;CL:0000377,1.07e-31,3;CL:0002327,2.86e-24,4;CL:0002076,4.02e-19,42;CL:0000223,1.55e-13,58;CL:0000066,4.72e-11,253 | ||
|ontology_enrichment_uberon=UBERON:0004815;2.17e-32;3!UBERON:0002031;2.17e-32;3!UBERON:0007196;8.97e-25;15!UBERON:0001558;8.97e-25;15!UBERON:0001911;2.17e-24;4!UBERON:0002185;1.02e-19;5!UBERON:0000485;2.90e-14;7!UBERON:0000065;4.25e-14;44!UBERON:0003126;5.94e-14;7!UBERON:0001005;5.94e-14;7!UBERON:0005178;7.25e-11;34!UBERON:0002224;7.25e-11;34!UBERON:0005181;9.80e-10;35!UBERON:0000072;2.30e-09;37!UBERON:0000915;9.28e-09;52 | |ontology_enrichment_development_v019=CL:0000377;1.18e-31;3!CL:0000223;3.62e-08;58 | ||
|ontology_enrichment_disease=DOID:305!9.35e-11!106;DOID:1749!7.14e-08!14;DOID:5093!5.07e-07!4;DOID:1612!5.07e-07!4;DOID:7!8.92e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.99e-12;4!DOID:1612;7.99e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.37e-12,4;DOID:1612,7.37e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0005911!2.01e-11!82;UBERON:0005153!9.43e-11!37;UBERON:0004119!7.49e-10!169;UBERON:0000925!7.49e-10!169;UBERON:0006595!7.49e-10!169;UBERON:0004815!2.11e-09!3;UBERON:0002031!2.11e-09!3;UBERON:0007196!7.35e-09!14;UBERON:0001558!7.35e-09!14;UBERON:0001949!2.23e-08!3;UBERON:0000365!2.28e-08!5;UBERON:0005157!5.58e-08!51;UBERON:0001004!1.94e-07!72;UBERON:0004807!2.06e-07!28;UBERON:0002185!4.07e-07!4;UBERON:0001911!4.41e-07!4;UBERON:0005333!4.41e-07!4;UBERON:0008425!4.41e-07!4;UBERON:0005311!4.41e-07!4;UBERON:0005910!5.75e-07!6;UBERON:0000915!7.74e-07!52;UBERON:0000065!8.87e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.17e-32;3!UBERON:0002031;2.17e-32;3!UBERON:0007196;8.97e-25;15!UBERON:0001558;8.97e-25;15!UBERON:0001911;2.17e-24;4!UBERON:0002185;1.02e-19;5!UBERON:0000485;2.90e-14;7!UBERON:0000065;4.25e-14;44!UBERON:0003126;5.94e-14;7!UBERON:0001005;5.94e-14;7!UBERON:0005178;7.25e-11;34!UBERON:0002224;7.25e-11;34!UBERON:0005181;9.80e-10;35!UBERON:0000072;2.30e-09;37!UBERON:0000915;9.28e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.68e-32,3;UBERON:0002031,2.68e-32,3;UBERON:0007196,9.36e-25,15;UBERON:0001558,9.36e-25,15;UBERON:0001911,2.86e-24,4;UBERON:0005333,2.86e-24,4;UBERON:0008425,2.86e-24,4;UBERON:0005311,2.86e-24,4;UBERON:0002185,1.16e-19,5;UBERON:0000065,1.26e-14,54;UBERON:0003126,5.68e-14,7;UBERON:0001005,5.68e-14,7;UBERON:0000076,1.88e-12,8;UBERON:0000915,4.22e-12,52;UBERON:0000485,3.43e-11,9;UBERON:0005178,9.90e-11,34;UBERON:0002224,9.90e-11,34;UBERON:0005181,2.06e-10,35;UBERON:0001004,2.33e-10,74;UBERON:0005153,6.84e-10,37;UBERON:0008947,1.47e-09,38;UBERON:0003258,1.47e-09,38;UBERON:0005157,1.07e-07,47;UBERON:0000072,1.20e-07,47 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,2.10844143144775,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0.286804595389004,0.487894824518382,0,0,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,2.24803506515239,0,0,0,0,0,0,0,0,0,0,5.53143078571493,6.86788929675898,0,0,0,0,0,0.141775097242386,2.14940454486836,5.23141089325132,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.736647911487171,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2891172915513,0.768760269460425,2.29702882490251,3.94515345336645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,1.34710957815717,2.68120910214315,3.26672954583968,0,0.43050537267123,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0,0.539210106883961,4.47552936689023,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.957651272384428,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0.144090417154106,0.343609788497747,0,0.288109595976299,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:83075367..83075383,- | |short_description=p@chr6:83075367..83075383,- | ||
}} | }} |
Latest revision as of 03:29, 31 July 2015
Short description: | p@chr6:83075367..83075383, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:83075367..83075383, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.82e-64 | 13 |
epithelial cell of tracheobronchial tree | 2.09e-41 | 9 |
epithelial cell of lower respiratory tract | 2.09e-41 | 9 |
bronchial epithelial cell | 2.68e-32 | 3 |
duct epithelial cell | 1.07e-31 | 3 |
branched duct epithelial cell | 1.07e-31 | 3 |
tracheal epithelial cell | 1.07e-31 | 3 |
tracheoblast | 1.07e-31 | 3 |
mammary gland epithelial cell | 2.86e-24 | 4 |
endo-epithelial cell | 4.02e-19 | 42 |
endodermal cell | 1.55e-13 | 58 |
epithelial cell | 4.72e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.68e-32 | 3 |
epithelium of bronchus | 2.68e-32 | 3 |
tracheobronchial tree | 9.36e-25 | 15 |
lower respiratory tract | 9.36e-25 | 15 |
mammary gland | 2.86e-24 | 4 |
mammary bud | 2.86e-24 | 4 |
mammary ridge | 2.86e-24 | 4 |
mammary placode | 2.86e-24 | 4 |
bronchus | 1.16e-19 | 5 |
respiratory tract | 1.26e-14 | 54 |
trachea | 5.68e-14 | 7 |
respiratory airway | 5.68e-14 | 7 |
external ectoderm | 1.88e-12 | 8 |
thoracic segment of trunk | 4.22e-12 | 52 |
simple columnar epithelium | 3.43e-11 | 9 |
thoracic cavity element | 9.90e-11 | 34 |
thoracic cavity | 9.90e-11 | 34 |
thoracic segment organ | 2.06e-10 | 35 |
respiratory system | 2.33e-10 | 74 |
epithelial bud | 6.84e-10 | 37 |
respiratory primordium | 1.47e-09 | 38 |
endoderm of foregut | 1.47e-09 | 38 |
epithelial fold | 1.07e-07 | 47 |
segment of respiratory tract | 1.20e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.37e-12 | 4 |
breast cancer | 7.37e-12 | 4 |