FFCP PHASE1:Hg19::chr7:121945203..121945213,+: Difference between revisions
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|id=chr7:121945203..121945213,+
|short_description=p3@ENST00000437317
|description=CAGE_peak_3_at_ENST00000437317_5end
|association_with_transcript=199bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=199bp_to_ENST00000437317_5end | |||
|cluster_id=chr7:121945203..121945213,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_3_at_ENST00000437317_5end | |||
|id=chr7:121945203..121945213,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.40e-18!5;CL:0002605!1.69e-10!3;CL:0000128!1.36e-07!7;CL:0000126!1.36e-07!7;CL:0000127!1.36e-07!7;CL:0002453!1.36e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.25e-38;5!CL:0002321;7.91e-28;15!CL:0000333;2.30e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.88e-38,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.55e-07;2 | |||
|ontology_enrichment_disease=DOID:171!3.09e-12!10;DOID:3493!2.23e-07!2;DOID:0050687!5.71e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:171;9.33e-30;10!DOID:3095;1.57e-13;22!DOID:2994;1.57e-13;22!DOID:169;8.74e-09;6!DOID:154;4.55e-07;2!DOID:3193;4.55e-07;2!DOID:4236;4.55e-07;2!DOID:962;4.55e-07;2!DOID:3493;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.05e-30,10;DOID:3095,1.47e-13,22;DOID:2994,1.47e-13,22;DOID:169,7.93e-09,6;DOID:3193,3.93e-07,2;DOID:962,3.93e-07,2;DOID:3493,4.98e-07,2;DOID:154,5.28e-07,2;DOID:4236,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.66e-23!41;UBERON:0001890!4.66e-23!41;UBERON:0006240!4.66e-23!41;UBERON:0003080!2.08e-22!42;UBERON:0000073!1.62e-17!94;UBERON:0001016!1.62e-17!94;UBERON:0005743!1.60e-16!86;UBERON:0002420!1.62e-16!9;UBERON:0007245!1.62e-16!9;UBERON:0010009!1.62e-16!9;UBERON:0010011!1.62e-16!9;UBERON:0000454!1.62e-16!9;UBERON:0002616!1.93e-16!59;UBERON:0000955!2.93e-16!69;UBERON:0006238!2.93e-16!69;UBERON:0009663!4.64e-16!7;UBERON:0001017!6.28e-16!82;UBERON:0003056!6.99e-16!61;UBERON:0001869!1.04e-15!32;UBERON:0001049!2.32e-15!57;UBERON:0005068!2.32e-15!57;UBERON:0006241!2.32e-15!57;UBERON:0007135!2.32e-15!57;UBERON:0002791!3.77e-15!33;UBERON:0002020!1.27e-14!34;UBERON:0003528!1.27e-14!34;UBERON:0001893!1.27e-14!34;UBERON:0002346!1.32e-14!90;UBERON:0000369!9.08e-13!4;UBERON:0002435!9.08e-13!4;UBERON:0000204!9.08e-13!4;UBERON:0010082!9.08e-13!4;UBERON:0002308!2.42e-12!9;UBERON:0000125!2.42e-12!9;UBERON:0001894!5.16e-12!7;UBERON:0006222!5.16e-12!7;UBERON:0000924!7.64e-12!173;UBERON:0006601!7.64e-12!173;UBERON:0005383!2.83e-10!3;UBERON:0005382!2.83e-10!3;UBERON:0003075!6.50e-10!86;UBERON:0007284!6.50e-10!86;UBERON:0000153!5.45e-09!129;UBERON:0007811!5.45e-09!129;UBERON:0000033!9.53e-09!123;UBERON:0004121!1.65e-08!169;UBERON:0000007!7.51e-08!2;UBERON:0001875!8.59e-08!2;UBERON:0006514!8.59e-08!2;UBERON:0001897!1.12e-07!2;UBERON:0001873!1.56e-07!2;UBERON:0010122!1.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;9.01e-28;4!UBERON:0000923;9.01e-28;4!UBERON:0010316;9.01e-28;4!UBERON:0005291;9.01e-28;4!UBERON:0002050;2.32e-22;5!UBERON:0005423;2.32e-22;5!UBERON:0000013;2.30e-10;5!UBERON:0002410;2.30e-10;5!UBERON:0000922;8.20e-08;49!UBERON:0009663;1.36e-07;7!UBERON:0001875;3.28e-07;2!UBERON:0006514;3.28e-07;2!UBERON:0000007;4.55e-07;2!UBERON:0001873;4.55e-07;2!UBERON:0003714;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.04e-10,5;UBERON:0002410,2.04e-10,5;UBERON:0009663,1.17e-07,7;UBERON:0001875,3.09e-07,2;UBERON:0006514,3.09e-07,2;UBERON:0001873,3.70e-07,2;UBERON:0010122,3.70e-07,2;UBERON:0003714,3.93e-07,2;UBERON:0000007,5.60e-07,2 | |||
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| ||
|short_description=p3@ENST00000437317 | |||
}} | }} |
Latest revision as of 05:32, 31 July 2015
Short description: | p3@ENST00000437317 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000437317_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 199bp_to_ENST00000437317_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.88e-38 | 5 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.04e-10 | 5 |
autonomic nervous system | 2.04e-10 | 5 |
telencephalic nucleus | 1.17e-07 | 7 |
globus pallidus | 3.09e-07 | 2 |
pallidum | 3.09e-07 | 2 |
caudate nucleus | 3.70e-07 | 2 |
future caudate nucleus | 3.70e-07 | 2 |
neural tissue | 3.93e-07 | 2 |
pituitary gland | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.05e-30 | 10 |
germ cell and embryonal cancer | 1.47e-13 | 22 |
germ cell cancer | 1.47e-13 | 22 |
neuroendocrine tumor | 7.93e-09 | 6 |
peripheral nerve sheath neoplasm | 3.93e-07 | 2 |
neurofibroma | 3.93e-07 | 2 |
signet ring cell adenocarcinoma | 4.98e-07 | 2 |
mixed cell type cancer | 5.28e-07 | 2 |
carcinosarcoma | 5.28e-07 | 2 |