FFCP PHASE1:Hg19::chr7:37947010..37947031,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:37947010..37947031,- | |||
|coexpression_cluster_id=C1538 | |||
|description=CAGE_peak_at_chr7:37947010..37947031,- | |||
|id=chr7:37947010..37947031,- | |||
|ontology_enrichment_celltype=CL:1000306!1.07e-10!4;CL:0002547!1.07e-10!4;CL:0000136!4.21e-10!15;CL:0000135!3.42e-09!3;CL:0000386!3.42e-09!3;CL:0000388!3.42e-09!3;CL:0002615!3.51e-09!3;CL:0002580!2.47e-08!3;CL:0002334!1.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.26e-24;3!CL:0000388;1.26e-24;3!CL:0000214;4.85e-12;3!CL:0002579;5.27e-12;3!CL:0002615;5.87e-12;3!CL:0002334;4.18e-11;12!CL:0000136;2.74e-10;13!CL:0002616;7.97e-10;1!CL:0002581;1.16e-09;1!CL:0002174;3.39e-09;1!CL:0002591;3.39e-09;1!CL:0000501;3.39e-09;1!CL:1000306;8.54e-09;4!CL:0002547;8.54e-09;4!CL:0002595;2.47e-07;5!CL:0000499;4.24e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.54e-24,3;CL:0000388,1.54e-24,3;CL:0000214,4.35e-12,3;CL:0002579,5.13e-12,3;CL:0002615,6.73e-12,3;CL:0002334,3.53e-11,12;CL:0002616,7.98e-10,1;CL:0002581,1.12e-09,1;CL:0002174,2.35e-09,1;CL:0000501,2.35e-09,1;CL:0002591,4.50e-09,1;CL:0000136,6.46e-09,15;CL:1000306,1.22e-08,4;CL:0002547,1.22e-08,4;CL:0002595,2.01e-07,5;CL:0000057,3.32e-07,76;CL:0000499,4.27e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.84e-12!6;UBERON:0002358!6.84e-12!6;UBERON:0003684!6.84e-12!6;UBERON:0001178!6.84e-12!6;UBERON:0004457!7.09e-11!12;UBERON:0000042!7.09e-11!12;UBERON:0000415!1.07e-10!4;UBERON:0007240!1.07e-10!4;UBERON:0005742!1.07e-10!4;UBERON:0005734!1.07e-10!4;UBERON:0004664!1.07e-10!4;UBERON:0004663!1.07e-10!4;UBERON:0000043!3.42e-09!3;UBERON:0001443!6.19e-08!11;UBERON:0005406!6.10e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.56e-32;9!UBERON:0000042;1.56e-32;9!UBERON:0007846;1.26e-24;3!UBERON:0000043;1.26e-24;3!UBERON:0007845;1.26e-24;3!UBERON:0003688;3.19e-22;6!UBERON:0002358;3.19e-22;6!UBERON:0003684;3.19e-22;6!UBERON:0001178;3.19e-22;6!UBERON:0005406;9.44e-18;2!UBERON:0006915;4.85e-12;3!UBERON:0007616;4.85e-12;3!UBERON:0002217;4.85e-12;3!UBERON:0002018;4.85e-12;3!UBERON:0005795;1.55e-09;1!UBERON:0002426;3.39e-09;1!UBERON:0003831;3.39e-09;1!UBERON:0003898;3.39e-09;1!UBERON:0004830;3.39e-09;1!UBERON:0003830;3.39e-09;1!UBERON:0005175;3.39e-09;1!UBERON:0001774;3.39e-09;1!UBERON:0001103;3.39e-09;1!UBERON:0004797;8.54e-09;4!UBERON:0000415;8.54e-09;4!UBERON:0007240;8.54e-09;4!UBERON:0005742;8.54e-09;4!UBERON:0005734;8.54e-09;4!UBERON:0004664;8.54e-09;4!UBERON:0004663;8.54e-09;4!UBERON:0003834;2.47e-07;5!UBERON:0001533;2.47e-07;5!UBERON:0001443;5.74e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.54e-24,3;UBERON:0000043,1.54e-24,3;UBERON:0007845,1.54e-24,3;UBERON:0004457,2.64e-24,12;UBERON:0000042,2.64e-24,12;UBERON:0003688,3.56e-22,6;UBERON:0002358,3.56e-22,6;UBERON:0003684,3.56e-22,6;UBERON:0001178,3.56e-22,6;UBERON:0005406,9.07e-18,2;UBERON:0006915,4.35e-12,3;UBERON:0007616,4.35e-12,3;UBERON:0002217,4.35e-12,3;UBERON:0002018,4.35e-12,3;UBERON:0002426,2.55e-09,1;UBERON:0003831,2.55e-09,1;UBERON:0003898,2.55e-09,1;UBERON:0004830,2.55e-09,1;UBERON:0003830,2.55e-09,1;UBERON:0005175,2.55e-09,1;UBERON:0001774,2.55e-09,1;UBERON:0001103,2.55e-09,1;UBERON:0010084,2.55e-09,1;UBERON:0000415,1.22e-08,4;UBERON:0007240,1.22e-08,4;UBERON:0005742,1.22e-08,4;UBERON:0005734,1.22e-08,4;UBERON:0004664,1.22e-08,4;UBERON:0004663,1.22e-08,4;UBERON:0004458,2.00e-07,49;UBERON:0003834,2.01e-07,5;UBERON:0001533,2.01e-07,5;UBERON:0001443,4.71e-07,11;UBERON:0004923,8.55e-07,66 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.986680828671798,2.00146596706261,5.36353313312745,26.1701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,1.14734648299525,1.06400514659507,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.3996218765488,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,1.98486246255021,0.153461973288062,0.561320188866147,2.43464383585832,0,7.72098821489316,5.93672265779964,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,2.19342140668156,0,0,0,1.13008116620243,0,1.99031692572366,0,0,0,0,0.6196469961995,0,0,0,0,0,2.9555068941673,8.56166721695745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.378806010550178,0.251567901752575,0,0,0.453692771289717,0,0,0.318593534327405,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,1.11598505450025,7.85698568673411,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.855690109280065,2.03448089157869,0,0.603821380773079,0 | |||
|short_description=p@chr7:37947010..37947031,- | |||
}} |
Latest revision as of 09:49, 31 July 2015
Short description: | p@chr7:37947010..37947031, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:37947010..37947031, - |
Coexpression cluster: | C1538_Adipocyte_Synoviocyte_Preadipocyte_tenocyte_cervix_Fibroblast_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.54e-24 | 3 |
tendon cell | 1.54e-24 | 3 |
synovial cell | 4.35e-12 | 3 |
omentum preadipocyte | 5.13e-12 | 3 |
adipocyte of omentum tissue | 6.73e-12 | 3 |
preadipocyte | 3.53e-11 | 12 |
perirenal adipocyte cell | 7.98e-10 | 1 |
perirenal preadipocyte | 1.12e-09 | 1 |
follicular cell of ovary | 2.35e-09 | 1 |
granulosa cell | 2.35e-09 | 1 |
smooth muscle cell of the pulmonary artery | 4.50e-09 | 1 |
fat cell | 6.46e-09 | 15 |
fibroblast of tunica adventitia of artery | 1.22e-08 | 4 |
fibroblast of the aortic adventitia | 1.22e-08 | 4 |
smooth muscle cell of the subclavian artery | 2.01e-07 | 5 |
fibroblast | 3.32e-07 | 76 |
stromal cell | 4.27e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.54e-24 | 3 |
tendon | 1.54e-24 | 3 |
regular connective tissue | 1.54e-24 | 3 |
cavity lining | 2.64e-24 | 12 |
serous membrane | 2.64e-24 | 12 |
omentum | 3.56e-22 | 6 |
peritoneum | 3.56e-22 | 6 |
abdominal cavity | 3.56e-22 | 6 |
visceral peritoneum | 3.56e-22 | 6 |
perirenal fat | 9.07e-18 | 2 |
stratified squamous epithelium | 4.35e-12 | 3 |
layer of synovial tissue | 4.35e-12 | 3 |
synovial joint | 4.35e-12 | 3 |
synovial membrane of synovial joint | 4.35e-12 | 3 |
chest muscle | 2.55e-09 | 1 |
respiratory system muscle | 2.55e-09 | 1 |
skeletal muscle of trunk | 2.55e-09 | 1 |
respiratory system skeletal muscle | 2.55e-09 | 1 |
thoracic segment muscle | 2.55e-09 | 1 |
chest organ | 2.55e-09 | 1 |
muscle of trunk | 2.55e-09 | 1 |
diaphragm | 2.55e-09 | 1 |
future diaphragm | 2.55e-09 | 1 |
artery wall | 1.22e-08 | 4 |
tunica adventitia of artery | 1.22e-08 | 4 |
adventitia | 1.22e-08 | 4 |
tunica adventitia of blood vessel | 1.22e-08 | 4 |
aorta tunica adventitia | 1.22e-08 | 4 |
aorta wall | 1.22e-08 | 4 |
body cavity or lining | 2.00e-07 | 49 |
thoracic segment blood vessel | 2.01e-07 | 5 |
subclavian artery | 2.01e-07 | 5 |
chest | 4.71e-07 | 11 |
organ component layer | 8.55e-07 | 66 |