FFCP PHASE1:Hg19::chr7:37947182..37947207,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:37947182..37947207,- | |||
|coexpression_cluster_id=C1538 | |||
|description=CAGE_peak_at_chr7:37947182..37947207,- | |||
|id=chr7:37947182..37947207,- | |||
|ontology_enrichment_celltype=CL:1000306!7.79e-13!4;CL:0002547!7.79e-13!4;CL:0002615!1.36e-10!3;CL:0002334!7.09e-09!12;CL:0002617!3.33e-07!2;CL:0000136!3.45e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.42e-30;3!CL:0000136;3.32e-19;13!CL:0002579;9.07e-15;3!CL:0000214;1.41e-14;3!CL:0000135;5.39e-14;3!CL:0000388;5.39e-14;3!CL:0002334;9.59e-14;12!CL:0002616;9.08e-12;1!CL:0002581;1.97e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.03e-30,3;CL:0000136,1.22e-16,15;CL:0002579,9.39e-15,3;CL:0000214,1.32e-14,3;CL:0000135,4.42e-14,3;CL:0000388,4.42e-14,3;CL:0002334,9.76e-14,12;CL:0002616,8.62e-12,1;CL:0002581,1.60e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!7.18e-14!6;UBERON:0002358!7.18e-14!6;UBERON:0003684!7.18e-14!6;UBERON:0001178!7.18e-14!6;UBERON:0000415!7.79e-13!4;UBERON:0007240!7.79e-13!4;UBERON:0005742!7.79e-13!4;UBERON:0005734!7.79e-13!4;UBERON:0004664!7.79e-13!4;UBERON:0004663!7.79e-13!4;UBERON:0004457!8.74e-13!12;UBERON:0000042!8.74e-13!12;UBERON:0006947!3.75e-09!3;UBERON:0004054!3.75e-09!3;UBERON:0004458!7.07e-08!49;UBERON:0005406!8.11e-08!2;UBERON:0003101!4.94e-07!22;UBERON:0000079!4.94e-07!22;UBERON:0005904!5.79e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.58e-54;9!UBERON:0000042;2.58e-54;9!UBERON:0003688;5.24e-42;6!UBERON:0002358;5.24e-42;6!UBERON:0003684;5.24e-42;6!UBERON:0001178;5.24e-42;6!UBERON:0005406;1.98e-21;2!UBERON:0006915;1.41e-14;3!UBERON:0007616;1.41e-14;3!UBERON:0002217;1.41e-14;3!UBERON:0002018;1.41e-14;3!UBERON:0007846;5.39e-14;3!UBERON:0000043;5.39e-14;3!UBERON:0007845;5.39e-14;3!UBERON:0005795;1.97e-11;1!UBERON:0004458;2.29e-11;48!UBERON:0002323;2.27e-08;45!UBERON:0004923;4.01e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.36e-42,6;UBERON:0002358,7.36e-42,6;UBERON:0003684,7.36e-42,6;UBERON:0001178,7.36e-42,6;UBERON:0004457,1.54e-40,12;UBERON:0000042,1.54e-40,12;UBERON:0005406,1.53e-21,2;UBERON:0004458,2.10e-15,49;UBERON:0006915,1.32e-14,3;UBERON:0007616,1.32e-14,3;UBERON:0002217,1.32e-14,3;UBERON:0002018,1.32e-14,3;UBERON:0007846,4.42e-14,3;UBERON:0000043,4.42e-14,3;UBERON:0007845,4.42e-14,3;UBERON:0002323,5.60e-10,46;UBERON:0004923,7.63e-09,66;UBERON:0003886,2.15e-08,54;UBERON:0002553,2.38e-07,61 | |||
|phase1_expression=1.63510541343501,0.428201047781966,2.25527046553554,1.0007329835313,3.5756887554183,8.72338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.926864265692532,2.0078563452417,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.99972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24053903909388,0,0.280660094433074,4.99742682097234,0,8.5252578206112,2.96836132889982,0,0.177561725313127,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.974853958525138,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,2.9555068941673,5.92730807327823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,3.07801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,1.58186518546373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,0.761610424337591,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50420656698514,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,1.36401656792831,0,0,0,1.0661699095049,0,0,0,0,0,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0.977931553462932,2.03448089157869,0,0.805095174364105,0 | |||
|short_description=p@chr7:37947182..37947207,- | |||
}} |
Latest revision as of 09:49, 31 July 2015
Short description: | p@chr7:37947182..37947207, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:37947182..37947207, - |
Coexpression cluster: | C1538_Adipocyte_Synoviocyte_Preadipocyte_tenocyte_cervix_Fibroblast_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.03e-30 | 3 |
fat cell | 1.22e-16 | 15 |
omentum preadipocyte | 9.39e-15 | 3 |
synovial cell | 1.32e-14 | 3 |
fibrocyte | 4.42e-14 | 3 |
tendon cell | 4.42e-14 | 3 |
preadipocyte | 9.76e-14 | 12 |
perirenal adipocyte cell | 8.62e-12 | 1 |
perirenal preadipocyte | 1.60e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.36e-42 | 6 |
peritoneum | 7.36e-42 | 6 |
abdominal cavity | 7.36e-42 | 6 |
visceral peritoneum | 7.36e-42 | 6 |
cavity lining | 1.54e-40 | 12 |
serous membrane | 1.54e-40 | 12 |
perirenal fat | 1.53e-21 | 2 |
body cavity or lining | 2.10e-15 | 49 |
stratified squamous epithelium | 1.32e-14 | 3 |
layer of synovial tissue | 1.32e-14 | 3 |
synovial joint | 1.32e-14 | 3 |
synovial membrane of synovial joint | 1.32e-14 | 3 |
dense regular connective tissue | 4.42e-14 | 3 |
tendon | 4.42e-14 | 3 |
regular connective tissue | 4.42e-14 | 3 |
body cavity | 5.60e-10 | 46 |
organ component layer | 7.63e-09 | 66 |
body cavity precursor | 2.15e-08 | 54 |
anatomical cavity | 2.38e-07 | 61 |