FFCP PHASE1:Hg19::chr7:45953398..45953411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:45953398..45953411,+ | |||
|coexpression_cluster_id=C4616 | |coexpression_cluster_id=C4616 | ||
|description=CAGE_peak_at_chr7:45953398..45953411,+ | |description=CAGE_peak_at_chr7:45953398..45953411,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000153!3.55e-11!9;CL:0000447!3.55e-11!9;CL:0002620!1.62e-09!23;CL:0000055!6.24e-09!180;CL:0000667!4.37e-08!6;CL:0000058!4.37e-08!6;CL:0000138!4.37e-08!6;CL:0000057!1.43e-07!75;CL:0002334!6.35e-07!12;CL:0000327!7.33e-07!14 | |ontology_enrichment_celltype=CL:0000153!3.55e-11!9;CL:0000447!3.55e-11!9;CL:0002620!1.62e-09!23;CL:0000055!6.24e-09!180;CL:0000667!4.37e-08!6;CL:0000058!4.37e-08!6;CL:0000138!4.37e-08!6;CL:0000057!1.43e-07!75;CL:0002334!6.35e-07!12;CL:0000327!7.33e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000153;7.19e-37;9!CL:0000447;7.19e-37;9!CL:0000138;7.66e-36;6!CL:0000327;3.55e-22;15!CL:0002620;1.65e-14;23!CL:0000499;6.83e-12;28!CL:0000151;5.30e-08;36 | |ontology_enrichment_celltype_v019=CL:0000153;7.19e-37;9!CL:0000447;7.19e-37;9!CL:0000138;7.66e-36;6!CL:0000327;3.55e-22;15!CL:0002620;1.65e-14;23!CL:0000499;6.83e-12;28!CL:0000151;5.30e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,5.35e-37,9;CL:0000447,5.35e-37,9;CL:0000058,7.34e-36,6;CL:0000138,7.34e-36,6;CL:0000327,2.98e-22,15;CL:0002620,1.77e-14,23;CL:0000499,6.23e-12,28;CL:0000151,2.86e-09,36 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.24e-11;5!DOID:450;1.24e-11;5!DOID:66;1.24e-11;5!DOID:423;1.24e-11;5!DOID:0080000;1.24e-11;5!DOID:11722;1.24e-11;5 | |ontology_enrichment_disease_v019=DOID:17;1.24e-11;5!DOID:450;1.24e-11;5!DOID:66;1.24e-11;5!DOID:423;1.24e-11;5!DOID:0080000;1.24e-11;5!DOID:11722;1.24e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.15e-11,5;DOID:450,1.15e-11,5;DOID:66,1.15e-11,5;DOID:423,1.15e-11,5;DOID:0080000,1.15e-11,5;DOID:11722,1.15e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.75e-07!45;UBERON:0002416!6.75e-07!45;UBERON:0002097!8.41e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!6.75e-07!45;UBERON:0002416!6.75e-07!45;UBERON:0002097!8.41e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.12e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002097;9.12e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.20e-08,41;UBERON:0002199,3.27e-07,46;UBERON:0002416,3.27e-07,46 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3372698286148,1.00267582127178,14.9191914529648,0,1.94653948121054,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351170855109,0,0.211931901159562,3.00091096084402,0,1.03056216018252,0,0.168776332241266,0.0974370051611986,4.29137416214995,0.276149695926898,0,2.13005755509969,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0,0.532685175939381,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0,1.89996871767898,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,1.37358282073117,0.336749488765919,0,0,0,0,0.680117776536817,0,0,1.79088841081487,0.926404341482917,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p@chr7:45953398..45953411,+ | |short_description=p@chr7:45953398..45953411,+ | ||
}} | }} |
Latest revision as of 10:26, 31 July 2015
Short description: | p@chr7:45953398..45953411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45953398..45953411, + |
Coexpression cluster: | C4616_Chondrocyte_Fibroblast_Synoviocyte_mesothelioma_renal_Smooth_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 5.35e-37 | 9 |
carbohydrate secreting cell | 5.35e-37 | 9 |
chondroblast | 7.34e-36 | 6 |
chondrocyte | 7.34e-36 | 6 |
extracellular matrix secreting cell | 2.98e-22 | 15 |
skin fibroblast | 1.77e-14 | 23 |
stromal cell | 6.23e-12 | 28 |
secretory cell | 2.86e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.20e-08 | 41 |
integument | 3.27e-07 | 46 |
integumental system | 3.27e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.15e-11 | 5 |
myotonic disease | 1.15e-11 | 5 |
muscle tissue disease | 1.15e-11 | 5 |
myopathy | 1.15e-11 | 5 |
muscular disease | 1.15e-11 | 5 |
myotonic dystrophy | 1.15e-11 | 5 |