FFCP PHASE1:Hg19::chr7:99277291..99277298,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:99277291..99277298,+ | |||
|description=CAGE_peak_at_chr7:99277291..99277298,+ | |||
|id=chr7:99277291..99277298,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-07!254;CL:0000223!3.04e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.18e-08;20!CL:0002178;1.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.63e-08,20;CL:0002178,1.37e-07,3;CL:0000066,1.94e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.26e-40!239;DOID:162!6.84e-40!235;DOID:0050687!1.95e-32!143;DOID:305!1.02e-23!106;DOID:0050686!3.00e-16!137;DOID:299!3.81e-14!25;DOID:1749!9.60e-13!14;DOID:170!2.18e-08!6;DOID:120!1.92e-07!27;DOID:7!5.85e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;4.60e-19;25!DOID:1749;4.50e-13;14!DOID:4929;5.00e-12;2!DOID:4231;4.24e-11;2!DOID:3493;4.24e-11;2!DOID:1907;4.24e-11;2!DOID:3119;4.84e-09;14!DOID:305;2.50e-07;106!DOID:3093;3.24e-07;11!DOID:3111;6.39e-07;1!DOID:3603;6.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.79e-25,106;DOID:0050687,2.27e-24,143;DOID:162,9.49e-22,235;DOID:14566,3.74e-21,239;DOID:299,4.54e-19,25;DOID:1749,4.72e-13,14;DOID:4929,4.63e-12,2;DOID:4231,8.29e-11,2;DOID:3493,8.29e-11,2;DOID:1907,8.29e-11,2;DOID:0050686,3.03e-09,137;DOID:3119,6.64e-09,14;DOID:3093,4.12e-07,11;DOID:3111,6.23e-07,1;DOID:3603,6.23e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.86e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;2.81e-07;7!UBERON:0001173;2.81e-07;7!UBERON:0004913;5.57e-07;1!UBERON:0003703;5.57e-07;1!UBERON:0001174;5.57e-07;1!UBERON:0004914;5.57e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.58e-07,1;UBERON:0003703,5.58e-07,1;UBERON:0001174,5.58e-07,1;UBERON:0004914,5.58e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85051632563187,0.532685175939381,0.328508624055237,0,1.27831416305955,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0.28853842595289,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,1.88723537409386,0,0,0,0,0,0.969332746095218,0,0,0,0,0,2.38966241399549,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.227884111694002,0.69169171316418,0.807818799687949,0,0,0,0,0,0,0,0,0,0,18.5958658069701,0.635746315921515,0.843992258112108,1.46909527343233,1.13082457147153,0,0,0,0,0.593042257361244,0,0,0,0,0,0.364909578431332,0.586993856796269,0.242780379534093,0,0,0,0,0.300646838828985,0,0.664653872707185,0.661983911750998,0,0,4.26914319044689,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0,0,0,1.64450309576101,0.596143835108969,0,0,1.84365286578528,0,0.39961921916426,1.58499458869517,0.114536596165916,0.686379991447858,4.89786313159709,0.372757606696298,0,4.62074300650288,5.43934800824133,1.12198039399954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.492137407573744,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,1.26720403823288,0,0,0,0,0.5085370753095,0,0,0.326587360109409,0,2.54486814322951,0.170388021785422,0.113312091520126,0,0,0,0,0.513260513652988,0.704815022316672,0,0,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.37494122388632,0.454947352624943,0,0.470531639396343,0,0,1.49254802886874,0.701139929541673,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0.813741466409323,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,1.92997432237433,0,0.453411851024545,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0.506827321959218,0.76872455576384,0,0,0,0,0,0,0.327609848846413,0.245772908753719,5.4941152073243,0,0,0,1.13503190713367,1.10463570151104,0,0,0,0.323474434190045,0.471797825567689,0.218419276384028,0,0.212574920101683,0.619678821295011,1.11728983594649,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,1.41563668017288,0.183428598521679,2.54156465530744,0,0.690359926060101,0.198916222116275,0,0,0,0.523813388962845,1.96526301012116,20.2562838117352,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0.460935950223117,0,0,0,1.77290761325952,0.333694205676207,0,0,1.12108865325516,0,3.67076905071656,0,0,0,0,0,0,0,0,0,0,0,0.426067023795788,0,0.22910686854405,0,0.955538938977433,0,1.07965256976767,1.21917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707029641304878,0,0,0,0,0,0,0,3.39252483350749,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0,0,1.95367844666339,0,0,2.87440646741078,0,0,0,0,0,0 | |||
|short_description=p@chr7:99277291..99277298,+ | |||
}} |
Latest revision as of 13:13, 31 July 2015
Short description: | p@chr7:99277291..99277298, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:99277291..99277298, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.63e-08 | 20 |
epithelial cell of stomach | 1.37e-07 | 3 |
epithelial cell | 1.94e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.58e-07 | 1 |
extrahepatic bile duct | 5.58e-07 | 1 |
common bile duct | 5.58e-07 | 1 |
duodenal papilla | 5.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.79e-25 | 106 |
cell type cancer | 2.27e-24 | 143 |
cancer | 9.49e-22 | 235 |
disease of cellular proliferation | 3.74e-21 | 239 |
adenocarcinoma | 4.54e-19 | 25 |
squamous cell carcinoma | 4.72e-13 | 14 |
tubular adenocarcinoma | 4.63e-12 | 2 |
histiocytoma | 8.29e-11 | 2 |
signet ring cell adenocarcinoma | 8.29e-11 | 2 |
malignant fibroxanthoma | 8.29e-11 | 2 |
organ system cancer | 3.03e-09 | 137 |
gastrointestinal system cancer | 6.64e-09 | 14 |
nervous system cancer | 4.12e-07 | 11 |
cystadenocarcinoma | 6.23e-07 | 1 |
mucinous cystadenocarcinoma | 6.23e-07 | 1 |