FFCP PHASE1:Hg19::chr8:102504507..102504532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:102504507..102504532,- | |||
|coexpression_cluster_id=C1541 | |||
|description=CAGE_peak_at_chr8:102504507..102504532,- | |description=CAGE_peak_at_chr8:102504507..102504532,- | ||
|id=chr8:102504507..102504532,- | |id=chr8:102504507..102504532,- | ||
|ontology_enrichment_celltype=CL:0000066!1.27e-20!254;CL:0002076!4.36e-19!43;CL:0000223!1.39e-15!59;CL:0002368!2.42e-10!13;CL:0002251!1.03e-07!21;CL:0002202!3.17e-07!9;CL:0002632!3.17e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.27e-20!254;CL:0002076!4.36e-19!43;CL:0000223!1.39e-15!59;CL:0002368!2.42e-10!13;CL:0002251!1.03e-07!21;CL:0002202!3.17e-07!9;CL:0002632!3.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.43e-12;19!CL:0002076;4.01e-12;42!CL:0002251;2.39e-10;20!CL:0002577;6.92e-08;3!CL:0002541;1.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.94e-14,42;CL:0000349,1.37e-12,19;CL:0000066,6.01e-11,253;CL:0000223,6.02e-11,58;CL:0002251,2.98e-10,20;CL:0002577,7.41e-08,3;CL:0002541,1.46e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.18e-08;86 | |||
|ontology_enrichment_disease=DOID:1749!1.21e-17!14;DOID:305!4.74e-17!106;DOID:0050687!8.62e-12!143;DOID:299!1.92e-09!25;DOID:5093!6.34e-07!4;DOID:1612!6.34e-07!4 | |ontology_enrichment_disease=DOID:1749!1.21e-17!14;DOID:305!4.74e-17!106;DOID:0050687!8.62e-12!143;DOID:299!1.92e-09!25;DOID:5093!6.34e-07!4;DOID:1612!6.34e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-24;14!DOID:299;5.48e-11;25!DOID:5093;3.40e-10;4!DOID:1612;3.40e-10;4!DOID:305;8.91e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.49e-24,14;DOID:305,6.23e-21,106;DOID:0050687,2.03e-14,143;DOID:299,5.84e-11,25;DOID:5093,3.37e-10,4;DOID:1612,3.37e-10,4;DOID:7,1.06e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.80e-21!169;UBERON:0000925!5.80e-21!169;UBERON:0006595!5.80e-21!169;UBERON:0001007!3.27e-15!155;UBERON:0001555!3.27e-15!155;UBERON:0007026!3.27e-15!155;UBERON:0000077!3.65e-14!130;UBERON:0001004!4.42e-14!72;UBERON:0005631!9.50e-14!14;UBERON:0000158!9.50e-14!14;UBERON:0004921!1.51e-12!129;UBERON:0004185!1.51e-12!129;UBERON:0000464!6.09e-12!104;UBERON:0005153!1.48e-11!37;UBERON:0000065!3.13e-11!53;UBERON:0005911!3.89e-11!82;UBERON:0005178!6.02e-11!34;UBERON:0002224!6.02e-11!34;UBERON:0000466!8.83e-11!126;UBERON:0005181!1.88e-10!35;UBERON:0003124!1.93e-10!7;UBERON:0000344!7.42e-10!12;UBERON:0005156!1.14e-09!59;UBERON:0000990!1.14e-09!59;UBERON:0000915!1.14e-09!52;UBERON:0000161!1.11e-08!35;UBERON:0003133!1.65e-08!48;UBERON:0002048!2.40e-08!22;UBERON:0000117!2.40e-08!22;UBERON:0000171!2.40e-08!22;UBERON:0000170!2.40e-08!22;UBERON:0005597!2.40e-08!22;UBERON:0000118!2.40e-08!22;UBERON:0005157!2.89e-08!51;UBERON:0001041!2.98e-08!98;UBERON:0004175!9.99e-08!25;UBERON:0003729!1.66e-07!5;UBERON:0003101!2.21e-07!22;UBERON:0000079!2.21e-07!22;UBERON:0000072!3.76e-07!46;UBERON:0003135!4.02e-07!11;UBERON:0000974!4.65e-07!10;UBERON:0008947!5.24e-07!38;UBERON:0003258!5.24e-07!38;UBERON:0000166!7.15e-07!21;UBERON:0001987!8.86e-07!4;UBERON:0004340!8.86e-07!4 | |ontology_enrichment_uberon=UBERON:0004119!5.80e-21!169;UBERON:0000925!5.80e-21!169;UBERON:0006595!5.80e-21!169;UBERON:0001007!3.27e-15!155;UBERON:0001555!3.27e-15!155;UBERON:0007026!3.27e-15!155;UBERON:0000077!3.65e-14!130;UBERON:0001004!4.42e-14!72;UBERON:0005631!9.50e-14!14;UBERON:0000158!9.50e-14!14;UBERON:0004921!1.51e-12!129;UBERON:0004185!1.51e-12!129;UBERON:0000464!6.09e-12!104;UBERON:0005153!1.48e-11!37;UBERON:0000065!3.13e-11!53;UBERON:0005911!3.89e-11!82;UBERON:0005178!6.02e-11!34;UBERON:0002224!6.02e-11!34;UBERON:0000466!8.83e-11!126;UBERON:0005181!1.88e-10!35;UBERON:0003124!1.93e-10!7;UBERON:0000344!7.42e-10!12;UBERON:0005156!1.14e-09!59;UBERON:0000990!1.14e-09!59;UBERON:0000915!1.14e-09!52;UBERON:0000161!1.11e-08!35;UBERON:0003133!1.65e-08!48;UBERON:0002048!2.40e-08!22;UBERON:0000117!2.40e-08!22;UBERON:0000171!2.40e-08!22;UBERON:0000170!2.40e-08!22;UBERON:0005597!2.40e-08!22;UBERON:0000118!2.40e-08!22;UBERON:0005157!2.89e-08!51;UBERON:0001041!2.98e-08!98;UBERON:0004175!9.99e-08!25;UBERON:0003729!1.66e-07!5;UBERON:0003101!2.21e-07!22;UBERON:0000079!2.21e-07!22;UBERON:0000072!3.76e-07!46;UBERON:0003135!4.02e-07!11;UBERON:0000974!4.65e-07!10;UBERON:0008947!5.24e-07!38;UBERON:0003258!5.24e-07!38;UBERON:0000166!7.15e-07!21;UBERON:0001987!8.86e-07!4;UBERON:0004340!8.86e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.05e-14;10!UBERON:0000158;9.05e-14;10!UBERON:0000478;2.50e-11;24!UBERON:0001987;5.37e-10;4!UBERON:0003343;7.90e-10;4!UBERON:0004785;7.90e-10;4!UBERON:0000058;1.26e-09;10!UBERON:0000974;1.45e-09;6!UBERON:0002294;2.84e-09;7!UBERON:0001173;2.84e-09;7!UBERON:0000305;2.92e-08;7!UBERON:0006947;1.14e-07;3!UBERON:0004054;1.14e-07;3!UBERON:0003124;1.53e-07;3!UBERON:0000920;1.53e-07;3!UBERON:0005178;1.77e-07;34!UBERON:0002224;1.77e-07;34!UBERON:0001723;3.44e-07;3!UBERON:0001033;3.44e-07;3!UBERON:0000165;4.77e-07;28!UBERON:0000344;5.24e-07;20!UBERON:0005181;6.62e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.53e-22,14;UBERON:0000158,8.53e-22,14;UBERON:0004119,5.31e-17,160;UBERON:0000925,5.31e-17,160;UBERON:0006595,5.31e-17,160;UBERON:0003124,7.60e-16,7;UBERON:0001007,1.28e-14,145;UBERON:0001555,1.28e-14,145;UBERON:0007026,1.28e-14,145;UBERON:0004921,4.68e-12,118;UBERON:0004175,5.87e-12,25;UBERON:0000478,2.43e-11,24;UBERON:0001987,5.75e-10,4;UBERON:0004340,5.75e-10,4;UBERON:0003343,8.18e-10,4;UBERON:0004785,8.18e-10,4;UBERON:0001004,8.84e-10,74;UBERON:0000161,1.10e-09,36;UBERON:0001041,1.31e-09,87;UBERON:0005795,1.46e-09,22;UBERON:0004923,2.91e-09,66;UBERON:0005156,3.76e-09,59;UBERON:0000990,3.76e-09,59;UBERON:0000915,1.24e-08,52;UBERON:0005178,1.51e-08,34;UBERON:0002224,1.51e-08,34;UBERON:0000995,2.03e-08,21;UBERON:0000305,2.74e-08,7;UBERON:0005181,3.29e-08,35;UBERON:0000166,4.34e-08,22;UBERON:0003975,6.18e-08,22;UBERON:0005153,1.03e-07,37;UBERON:0006947,1.18e-07,3;UBERON:0004054,1.18e-07,3;UBERON:0005911,1.34e-07,82;UBERON:0003133,1.38e-07,48;UBERON:0000920,1.46e-07,3;UBERON:0005157,3.26e-07,47;UBERON:0004871,3.52e-07,8;UBERON:0001723,3.74e-07,3;UBERON:0001033,3.74e-07,3;UBERON:0010056,3.74e-07,3;UBERON:0002294,4.69e-07,9;UBERON:0001173,4.69e-07,9;UBERON:0004912,4.69e-07,9;UBERON:0000344,5.29e-07,20 | |||
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|short_description=p@chr8:102504507..102504532,- | |short_description=p@chr8:102504507..102504532,- | ||
}} | }} |
Latest revision as of 13:35, 31 July 2015
Short description: | p@chr8:102504507..102504532, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:102504507..102504532, - |
Coexpression cluster: | C1541_amniotic_Amniotic_MCF7_Placental_chorionic_oral_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.94e-14 | 42 |
extraembryonic cell | 1.37e-12 | 19 |
epithelial cell | 6.01e-11 | 253 |
endodermal cell | 6.02e-11 | 58 |
epithelial cell of alimentary canal | 2.98e-10 | 20 |
placental epithelial cell | 7.41e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.49e-24 | 14 |
carcinoma | 6.23e-21 | 106 |
cell type cancer | 2.03e-14 | 143 |
adenocarcinoma | 5.84e-11 | 25 |
thoracic cancer | 3.37e-10 | 4 |
breast cancer | 3.37e-10 | 4 |
disease of anatomical entity | 1.06e-07 | 39 |