FFCP PHASE1:Hg19::chr8:8318890..8318903,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:8318890..8318903,-
|short_description=p1@ENST00000521218
|description=CAGE_peak_1_at_ENST00000521218_5end
|association_with_transcript=-43bp_to_ENST0000052...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000521218_5end | |||
|cluster_id=chr8:8318890..8318903,- | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_1_at_ENST00000521218_5end | |||
|id=chr8:8318890..8318903,- | |||
|ontology_enrichment_celltype=CL:0000223!7.46e-10!59;CL:0000066!4.15e-09!254;CL:0002076!1.96e-08!43;CL:0000039!7.47e-07!7;CL:0000586!7.47e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.10e-28;5!CL:0002563;1.79e-16;4!CL:0000349;2.88e-13;19!CL:0002253;4.02e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.77e-28,5;CL:0002563,1.79e-16,4;CL:0000349,2.97e-13,19;CL:0002253,4.02e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!2.61e-12!4;DOID:1612!2.61e-12!4;DOID:299!7.11e-10!25;DOID:305!3.13e-08!106;DOID:0050687!7.85e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.93e-16;1!DOID:178;1.93e-16;1!DOID:326;1.93e-16;1!DOID:3978;1.93e-16;1!DOID:3394;1.93e-16;1!DOID:5844;1.93e-16;1!DOID:3149;1.93e-16;1!DOID:3451;6.93e-09;2!DOID:4159;6.93e-09;2!DOID:4074;6.93e-09;2!DOID:114;6.93e-09;2!DOID:4905;6.93e-09;2!DOID:0060122;6.93e-09;2!DOID:3498;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.65e-16,1;DOID:326,1.65e-16,1;DOID:3978,1.65e-16,1;DOID:3394,1.65e-16,1;DOID:5844,1.65e-16,1;DOID:3151,2.63e-16,1;DOID:3149,2.63e-16,1;DOID:4074,5.49e-09,2;DOID:4905,5.49e-09,2;DOID:3498,5.49e-09,2;DOID:114,6.42e-09,2;DOID:3451,8.09e-09,2;DOID:4159,8.09e-09,2;DOID:0060122,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.70e-15!169;UBERON:0000925!3.70e-15!169;UBERON:0006595!3.70e-15!169;UBERON:0003929!9.53e-14!54;UBERON:0002294!1.13e-13!7;UBERON:0001173!1.13e-13!7;UBERON:0004912!1.13e-13!7;UBERON:0005631!5.08e-13!14;UBERON:0000158!5.08e-13!14;UBERON:0000077!1.46e-12!130;UBERON:0005911!5.87e-12!82;UBERON:0001007!5.59e-11!155;UBERON:0001555!5.59e-11!155;UBERON:0007026!5.59e-11!155;UBERON:0004921!9.95e-09!129;UBERON:0004185!9.95e-09!129;UBERON:0002110!1.10e-08!3;UBERON:0006242!1.10e-08!3;UBERON:0001987!1.22e-07!4;UBERON:0004340!1.22e-07!4;UBERON:0000305!2.53e-07!7;UBERON:0003124!2.65e-07!7;UBERON:0000478!5.80e-07!24;UBERON:0002394!6.74e-07!4;UBERON:0003928!6.74e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.67e-20;7!UBERON:0001242;1.79e-16;4!UBERON:0001262;1.79e-16;4!UBERON:0004786;1.79e-16;4!UBERON:0004808;1.79e-16;4!UBERON:0001277;1.79e-16;4!UBERON:0005631;1.47e-14;10!UBERON:0000158;1.47e-14;10!UBERON:0000478;1.45e-10;24!UBERON:0000485;7.98e-10;7!UBERON:0003929;7.98e-10;7!UBERON:0003350;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.03e-20,7;UBERON:0004871,5.91e-18,8;UBERON:0005631,7.32e-18,14;UBERON:0000158,7.32e-18,14;UBERON:0001242,1.79e-16,4;UBERON:0001262,1.79e-16,4;UBERON:0004786,1.79e-16,4;UBERON:0004808,1.79e-16,4;UBERON:0001277,1.79e-16,4;UBERON:0000478,1.48e-10,24;UBERON:0003350,1.04e-08,8;UBERON:0004923,3.61e-08,66;UBERON:0000485,7.77e-08,9 | |||
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| 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| ||
|short_description=p1@ENST00000521218 | |||
}} | }} |
Latest revision as of 20:12, 31 July 2015
Short description: | p1@ENST00000521218 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000521218_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | -43bp_to_ENST00000521218_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.77e-28 | 5 |
intestinal epithelial cell | 1.79e-16 | 4 |
extraembryonic cell | 2.97e-13 | 19 |
epithelial cell of large intestine | 4.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.03e-20 | 7 |
somatic layer of lateral plate mesoderm | 5.91e-18 | 8 |
extraembryonic membrane | 7.32e-18 | 14 |
membranous layer | 7.32e-18 | 14 |
intestinal mucosa | 1.79e-16 | 4 |
wall of intestine | 1.79e-16 | 4 |
gastrointestinal system mucosa | 1.79e-16 | 4 |
gastrointestinal system epithelium | 1.79e-16 | 4 |
intestinal epithelium | 1.79e-16 | 4 |
extraembryonic structure | 1.48e-10 | 24 |
epithelium of mucosa | 1.04e-08 | 8 |
organ component layer | 3.61e-08 | 66 |
simple columnar epithelium | 7.77e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.65e-16 | 1 |
ischemia | 1.65e-16 | 1 |
extrinsic cardiomyopathy | 1.65e-16 | 1 |
myocardial ischemia | 1.65e-16 | 1 |
myocardial infarction | 1.65e-16 | 1 |
skin squamous cell carcinoma | 2.63e-16 | 1 |
keratoacanthoma | 2.63e-16 | 1 |
pancreas adenocarcinoma | 5.49e-09 | 2 |
pancreatic carcinoma | 5.49e-09 | 2 |
pancreatic ductal adenocarcinoma | 5.49e-09 | 2 |
heart disease | 6.42e-09 | 2 |
skin carcinoma | 8.09e-09 | 2 |
skin cancer | 8.09e-09 | 2 |
integumentary system cancer | 8.09e-09 | 2 |