FFCP PHASE1:Hg19::chr8:9409270..9409304,+: Difference between revisions
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|id=chr8:9409270..9409304,+
|short_description=p@chr8:9409270..9409304,+
|description=CAGE_peak_at_chr8:9409270..9409304,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:9409270..9409304,+ | |||
|description=CAGE_peak_at_chr8:9409270..9409304,+ | |||
|id=chr8:9409270..9409304,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.18e-11!13;CL:0002076!4.80e-10!43;CL:0000223!3.99e-08!59;CL:0002178!5.98e-07!3;CL:0002573!8.45e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.70e-15;5!CL:0000197;3.65e-13;6!CL:0000098;3.65e-13;6!CL:0002167;3.65e-13;6!CL:0002076;3.94e-09;42!CL:0002231;1.82e-07;3!CL:0000307;2.79e-07;3!CL:0002178;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.77e-13,6;CL:0000098,3.77e-13,6;CL:0002167,3.77e-13,6;CL:0002076,8.36e-11,42;CL:0000223,7.79e-08,58;CL:0002231,1.82e-07,3;CL:0002178,2.63e-07,3;CL:0000068,3.35e-07,3;CL:0000069,3.35e-07,3;CL:0000307,3.35e-07,3;CL:0000377,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:171!1.25e-20!10;DOID:169!3.31e-12!6;DOID:3095!7.87e-09!22;DOID:2994!7.87e-09!22;DOID:14566!2.60e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:171;7.09e-17;10!DOID:169;6.50e-13;6!DOID:3493;2.72e-10;2!DOID:3095;5.20e-08;22!DOID:2994;5.20e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.54e-17,10;DOID:169,6.12e-13,6;DOID:3493,2.49e-10,2;DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000010!3.26e-12!8;UBERON:0000013!1.17e-08!5;UBERON:0002410!1.17e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.70e-15;5!UBERON:0002410;2.70e-15;5!UBERON:0000010;6.35e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.51e-15,5;UBERON:0002410,2.51e-15,5;UBERON:0000010,6.11e-09,8 | |||
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| ||
|short_description=p@chr8:9409270..9409304,+ | |||
}} | }} |
Latest revision as of 20:35, 31 July 2015
Short description: | p@chr8:9409270..9409304, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:9409270..9409304, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.77e-13 | 6 |
sensory epithelial cell | 3.77e-13 | 6 |
olfactory epithelial cell | 3.77e-13 | 6 |
endo-epithelial cell | 8.36e-11 | 42 |
endodermal cell | 7.79e-08 | 58 |
epithelial cell of prostate | 1.82e-07 | 3 |
epithelial cell of stomach | 2.63e-07 | 3 |
duct epithelial cell | 3.35e-07 | 3 |
branched duct epithelial cell | 3.35e-07 | 3 |
tracheal epithelial cell | 3.35e-07 | 3 |
tracheoblast | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.51e-15 | 5 |
autonomic nervous system | 2.51e-15 | 5 |
peripheral nervous system | 6.11e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.54e-17 | 10 |
neuroendocrine tumor | 6.12e-13 | 6 |
signet ring cell adenocarcinoma | 2.49e-10 | 2 |
germ cell and embryonal cancer | 5.01e-08 | 22 |
germ cell cancer | 5.01e-08 | 22 |