FFCP PHASE1:Hg19::chr8:95487272..95487330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=25788 | |EntrezGene=entrezgene:25788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17228 | |HGNC=HGNC:17228 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F6WBS8,E5RI14,E5RJF7,F5H7U4 | |UniProt=uniprot:F6WBS8,uniprot:E5RI14,uniprot:E5RJF7,uniprot:F5H7U4 | ||
|association_with_transcript=0bp_to_ENST00000297592,ENST00000463267,ENST00000518998,ENST00000543299,ENST00000546218,uc003ygk.2,uc003ygl.1,uc003ygn.1_5end | |association_with_transcript=0bp_to_ENST00000297592,ENST00000463267,ENST00000518998,ENST00000543299,ENST00000546218,uc003ygk.2,uc003ygl.1,uc003ygn.1_5end | ||
|cluster_id=chr8:95487272..95487330,- | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_RAD54B_5end | |description=CAGE_peak_1_at_RAD54B_5end | ||
Revision as of 20:39, 31 July 2015
| Short description: | p1@RAD54B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RAD54B_5end |
| Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
| Association with transcript: | 0bp_to_ENST00000297592, ENST00000463267, ENST00000518998, ENST00000543299, ENST00000546218, uc003ygk.2, uc003ygl.1, uc003ygn.1_5end |
| EntrezGene: | 25788 |
| HGNC: | 17228 |
| UniProt: | F6WBS8E5RI14E5RJF7F5H7U4 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@RAD54B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.58e-09 | 253 |
| neural cell | 5.45e-08 | 25 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 2.85e-54 | 235 |
| disease of cellular proliferation | 3.05e-52 | 239 |
| cell type cancer | 3.07e-30 | 143 |
| organ system cancer | 3.58e-25 | 137 |
| carcinoma | 3.33e-24 | 106 |
| hematologic cancer | 6.50e-19 | 51 |
| immune system cancer | 6.50e-19 | 51 |
| leukemia | 1.16e-14 | 39 |
| myeloid leukemia | 5.03e-12 | 31 |
| disease of anatomical entity | 1.19e-07 | 39 |
Showing 1 to 10 of 10 entries
