FFCP PHASE1:Hg19::chr9:130899685..130899694,+: Difference between revisions
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|id=chr9:130899685..130899694,+
|short_description=p@chr9:130899685..130899694,+
|description=CAGE_peak_at_chr9:130899685..130899694,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:130899685..130899694,+ | |||
|description=CAGE_peak_at_chr9:130899685..130899694,+ | |||
|id=chr9:130899685..130899694,+ | |||
|ontology_enrichment_celltype=CL:0002178!3.93e-07!3;CL:0000239!4.30e-07!3;CL:1000615!4.30e-07!3;CL:0002306!4.30e-07!3;CL:0000842!7.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1001319;8.64e-26;1!CL:1000600;8.64e-26;1!CL:1000415;1.29e-13;2!CL:0002178;1.19e-09;3!CL:0000306;1.86e-07;4!CL:0002222;1.86e-07;4!CL:0002224;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.62e-26,1;CL:1000600,7.62e-26,1;CL:1000415,1.07e-13,2;CL:0002178,1.19e-09,3;CL:0000306,1.92e-07,4;CL:0002222,1.92e-07,4;CL:0002224,1.92e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!2.02e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;8.28e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.28e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.87e-14!15;UBERON:0000179!1.87e-14!15;UBERON:0000463!1.87e-14!15;UBERON:0002394!1.04e-10!4;UBERON:0003928!1.04e-10!4;UBERON:0002294!1.08e-10!7;UBERON:0001173!1.08e-10!7;UBERON:0004912!1.08e-10!7;UBERON:0000002!3.61e-07!6;UBERON:0001560!3.61e-07!6;UBERON:0006853!4.30e-07!3;UBERON:0007685!4.30e-07!3;UBERON:0004134!4.30e-07!3;UBERON:0005156!7.12e-07!59;UBERON:0000990!7.12e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.64e-26;1!UBERON:0001256;8.64e-26;1!UBERON:0001259;8.64e-26;1!UBERON:0000178;1.07e-15;15!UBERON:0000179;1.07e-15;15!UBERON:0000463;1.07e-15;15!UBERON:0001255;1.29e-13;2!UBERON:0001556;1.29e-13;2!UBERON:0002075;5.58e-13;18!UBERON:0002110;1.60e-09;3!UBERON:0002390;8.62e-08;32!UBERON:0010077;1.86e-07;4!UBERON:0005389;1.86e-07;4!UBERON:0000484;1.86e-07;4!UBERON:0000965;1.86e-07;4!UBERON:0001803;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.62e-26,1;UBERON:0001256,7.62e-26,1;UBERON:0001259,7.62e-26,1;UBERON:0000178,1.07e-15,15;UBERON:0000179,1.07e-15,15;UBERON:0000463,1.07e-15,15;UBERON:0001255,1.21e-13,2;UBERON:0001556,1.21e-13,2;UBERON:0002075,5.47e-13,18;UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3;UBERON:0010077,1.92e-07,4;UBERON:0005389,1.92e-07,4;UBERON:0000484,1.92e-07,4;UBERON:0002546,1.92e-07,4;UBERON:0000965,1.92e-07,4;UBERON:0001803,1.92e-07,4;UBERON:0003073,1.92e-07,4;UBERON:0005426,1.92e-07,4 | |||
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| ||
|short_description=p@chr9:130899685..130899694,+ | |||
}} | }} |
Latest revision as of 23:07, 31 July 2015
Short description: | p@chr9:130899685..130899694, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130899685..130899694, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.62e-26 | 1 |
lower urinary tract cell | 7.62e-26 | 1 |
epithelial cell of gall bladder | 1.07e-13 | 2 |
epithelial cell of stomach | 1.19e-09 | 3 |
crystallin accumulating cell | 1.92e-07 | 4 |
vertebrate lens cell | 1.92e-07 | 4 |
lens epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.62e-26 | 1 |
wall of urinary bladder | 7.62e-26 | 1 |
mucosa of urinary bladder | 7.62e-26 | 1 |
blood | 1.07e-15 | 15 |
haemolymphatic fluid | 1.07e-15 | 15 |
organism substance | 1.07e-15 | 15 |
urinary bladder | 1.21e-13 | 2 |
lower urinary tract | 1.21e-13 | 2 |
viscus | 5.47e-13 | 18 |
gallbladder | 1.41e-09 | 3 |
gall bladder primordium | 1.41e-09 | 3 |
cuboidal epithelium | 1.92e-07 | 4 |
transparent eye structure | 1.92e-07 | 4 |
simple cuboidal epithelium | 1.92e-07 | 4 |
cranial placode | 1.92e-07 | 4 |
lens of camera-type eye | 1.92e-07 | 4 |
epithelium of lens | 1.92e-07 | 4 |
lens placode | 1.92e-07 | 4 |
lens vesicle | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.28e-14 | 2 |