FFCP PHASE1:Hg19::chr9:130913070..130913089,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130913070..130913089,+ | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr9:130913070..130913089,+ | |description=CAGE_peak_at_chr9:130913070..130913089,+ | ||
|id=chr9:130913070..130913089,+ | |id=chr9:130913070..130913089,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.01e-12;3!CL:1001319;8.90e-10;1!CL:1000600;8.90e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.57e-12,3;CL:1001319,9.70e-10,1;CL:1000600,9.70e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.56e-07!25;DOID:305!5.33e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.82e-18;2!DOID:4929;1.59e-17;2!DOID:299;9.65e-16;25!DOID:3111;4.08e-10;1!DOID:3603;4.08e-10;1!DOID:9119;5.30e-10;1!DOID:8552;1.76e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.08e-18,2;DOID:4929,2.04e-17,2;DOID:299,1.16e-15,25;DOID:3111,4.09e-10,1;DOID:3603,4.09e-10,1;DOID:9119,5.31e-10,1;DOID:8552,1.15e-09,1;DOID:305,2.45e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.07e-16!15;UBERON:0000179!1.07e-16!15;UBERON:0000463!1.07e-16!15 | |ontology_enrichment_uberon=UBERON:0000178!1.07e-16!15;UBERON:0000179!1.07e-16!15;UBERON:0000463!1.07e-16!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;8.90e-10;1!UBERON:0004913;8.90e-10;1!UBERON:0003703;8.90e-10;1!UBERON:0001256;8.90e-10;1!UBERON:0001259;8.90e-10;1!UBERON:0001174;8.90e-10;1!UBERON:0004914;8.90e-10;1!UBERON:0002394;1.92e-09;4!UBERON:0003928;1.92e-09;4!UBERON:0000178;3.19e-09;15!UBERON:0000179;3.19e-09;15!UBERON:0000463;3.19e-09;15!UBERON:0000945;1.08e-07;5!UBERON:0010039;1.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.50e-10,1;UBERON:0003703,7.50e-10,1;UBERON:0001174,7.50e-10,1;UBERON:0004914,7.50e-10,1;UBERON:0004645,9.70e-10,1;UBERON:0001256,9.70e-10,1;UBERON:0001259,9.70e-10,1;UBERON:0000178,3.19e-09,15;UBERON:0000179,3.19e-09,15;UBERON:0000463,3.19e-09,15;UBERON:0004921,4.68e-08,118;UBERON:0001041,5.43e-08,87 | |||
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| ||
|short_description=p@chr9:130913070..130913089,+ | |short_description=p@chr9:130913070..130913089,+ | ||
}} | }} |
Latest revision as of 23:07, 31 July 2015
Short description: | p@chr9:130913070..130913089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130913070..130913089, + |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.57e-12 | 3 |
bladder cell | 9.70e-10 | 1 |
lower urinary tract cell | 9.70e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.50e-10 | 1 |
extrahepatic bile duct | 7.50e-10 | 1 |
common bile duct | 7.50e-10 | 1 |
duodenal papilla | 7.50e-10 | 1 |
urinary bladder urothelium | 9.70e-10 | 1 |
wall of urinary bladder | 9.70e-10 | 1 |
mucosa of urinary bladder | 9.70e-10 | 1 |
blood | 3.19e-09 | 15 |
haemolymphatic fluid | 3.19e-09 | 15 |
organism substance | 3.19e-09 | 15 |
subdivision of digestive tract | 4.68e-08 | 118 |
foregut | 5.43e-08 | 87 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.08e-18 | 2 |
tubular adenocarcinoma | 2.04e-17 | 2 |
adenocarcinoma | 1.16e-15 | 25 |
cystadenocarcinoma | 4.09e-10 | 1 |
mucinous cystadenocarcinoma | 4.09e-10 | 1 |
acute myeloid leukemia | 5.31e-10 | 1 |
chronic myeloid leukemia | 1.15e-09 | 1 |
carcinoma | 2.45e-09 | 106 |