FFCP PHASE1:Hg19::chr9:92058365..92058396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:92058365..92058396,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr9:92058365..92058396,- | |description=CAGE_peak_at_chr9:92058365..92058396,- | ||
|id=chr9:92058365..92058396,- | |id=chr9:92058365..92058396,- | ||
|ontology_enrichment_celltype=CL:0000349!4.56e-12!3;CL:0002577!4.56e-12!3;CL:0002536!1.54e-08!2;CL:0002537!1.75e-07!5 | |ontology_enrichment_celltype=CL:0000349!4.56e-12!3;CL:0002577!4.56e-12!3;CL:0002536!1.54e-08!2;CL:0002537!1.75e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.22e-43;19!CL:0002577;4.09e-40;3!CL:0002536;5.33e-27;2!CL:0002537;1.02e-24;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.26e-43,19;CL:0002577,5.01e-40,3;CL:0002536,4.67e-27,2;CL:0002537,1.02e-24,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.00e-14;1!UBERON:0008814;5.19e-08;2!UBERON:0010056;5.19e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.03e-24!14;UBERON:0000158!1.03e-24!14;UBERON:0001987!8.09e-15!4;UBERON:0004340!8.09e-15!4;UBERON:0000478!1.65e-13!24;UBERON:0000305!1.67e-13!7;UBERON:0003124!7.16e-13!7;UBERON:0004871!9.16e-12!8;UBERON:0007023!7.97e-11!115;UBERON:0005795!3.32e-09!22;UBERON:0000062!1.57e-07!511;UBERON:0000995!2.03e-07!21;UBERON:0003975!4.92e-07!22 | |ontology_enrichment_uberon=UBERON:0005631!1.03e-24!14;UBERON:0000158!1.03e-24!14;UBERON:0001987!8.09e-15!4;UBERON:0004340!8.09e-15!4;UBERON:0000478!1.65e-13!24;UBERON:0000305!1.67e-13!7;UBERON:0003124!7.16e-13!7;UBERON:0004871!9.16e-12!8;UBERON:0007023!7.97e-11!115;UBERON:0005795!3.32e-09!22;UBERON:0000062!1.57e-07!511;UBERON:0000995!2.03e-07!21;UBERON:0003975!4.92e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.32e-47;7!UBERON:0000478;1.96e-34;24!UBERON:0005631;5.01e-33;10!UBERON:0000158;5.01e-33;10!UBERON:0001987;2.72e-30;4!UBERON:0001723;8.68e-19;3!UBERON:0001033;8.68e-19;3!UBERON:0002372;1.00e-14;1!UBERON:0001961;1.00e-14;1!UBERON:0001744;1.00e-14;1!UBERON:0001042;1.00e-14;1!UBERON:0001735;1.00e-14;1!UBERON:0005795;1.72e-14;1!UBERON:0000341;3.95e-08;2!UBERON:0006562;5.19e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.22e-59,14;UBERON:0000158,2.22e-59,14;UBERON:0000305,3.93e-47,7;UBERON:0004871,2.86e-41,8;UBERON:0000478,2.00e-34,24;UBERON:0001987,3.17e-30,4;UBERON:0004340,3.17e-30,4;UBERON:0001723,7.94e-19,3;UBERON:0001033,7.94e-19,3;UBERON:0010056,7.94e-19,3;UBERON:0003124,1.39e-17,7;UBERON:0004923,2.53e-15,66;UBERON:0005795,6.63e-15,22;UBERON:0002372,8.17e-15,1;UBERON:0001961,8.17e-15,1;UBERON:0001744,8.17e-15,1;UBERON:0001735,8.17e-15,1;UBERON:0001042,1.09e-12,10;UBERON:0009145,1.09e-12,10;UBERON:0006562,1.37e-11,11;UBERON:0000995,2.77e-10,21;UBERON:0003975,7.92e-10,22;UBERON:0004175,1.12e-08,25;UBERON:0000341,4.09e-08,2;UBERON:0001557,6.24e-07,19 | |||
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| ||
|short_description=p@chr9:92058365..92058396,- | |short_description=p@chr9:92058365..92058396,- | ||
}} | }} |
Latest revision as of 03:24, 1 August 2015
Short description: | p@chr9:92058365..92058396, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:92058365..92058396, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.26e-43 | 19 |
placental epithelial cell | 5.01e-40 | 3 |
amniotic epithelial cell | 4.67e-27 | 2 |
amnion mesenchymal stem cell | 1.02e-24 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.22e-59 | 14 |
membranous layer | 2.22e-59 | 14 |
amnion | 3.93e-47 | 7 |
somatic layer of lateral plate mesoderm | 2.86e-41 | 8 |
extraembryonic structure | 2.00e-34 | 24 |
placenta | 3.17e-30 | 4 |
allantois | 3.17e-30 | 4 |
tongue | 7.94e-19 | 3 |
gustatory system | 7.94e-19 | 3 |
future tongue | 7.94e-19 | 3 |
chorion | 1.39e-17 | 7 |
organ component layer | 2.53e-15 | 66 |
embryonic uterus | 6.63e-15 | 22 |
tonsil | 8.17e-15 | 1 |
mucosa-associated lymphoid tissue | 8.17e-15 | 1 |
lymphoid tissue | 8.17e-15 | 1 |
tonsillar ring | 8.17e-15 | 1 |
chordate pharynx | 1.09e-12 | 10 |
pharyngeal region of foregut | 1.09e-12 | 10 |
pharynx | 1.37e-11 | 11 |
uterus | 2.77e-10 | 21 |
internal female genitalia | 7.92e-10 | 22 |
internal genitalia | 1.12e-08 | 25 |
throat | 4.09e-08 | 2 |
upper respiratory tract | 6.24e-07 | 19 |